Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181305g00020 ATGATGAACGTGGATCTGGAGTCTCTGGCGGAGGCCACTTCCGGCGCCATTGGATCACTCGTAAGCACCACCATCCTCTACCCTCTCGACACCTGCAAGACAAAGTACCAAGCTGAGGCTCGCTCCCATGGCGGCCAAAGATACAAGCATCTCTCAGATGTGTTATTTGAGGCAATAGCAAACCGCCAGGTGTTTTCGCTTTACCAGGGCCTCGGAACAAAGAATCTCCAGTCCTTCATTTCACAGTTTGTCTACTTCTATGGCTATAGCTATTTTAAAAGACTGTATCTGGAAAAGAGTGGAAACAAGTCCATTGGAACAAAAGCAAACTTGTTAATTGCTGCTGCTGCTGGGGCCTGCACAGCTGTTGCGACTCAGCCCCTGGATACAGCCTCTTCAAGGATGCAGACCAGTGACTTTGGAAAGTCTAAAGGACTATTGCACACCCTTACAGAAGGCACCTGGAGTGATGCTTTCGATGGCCTAAGCATTTCCTTGTTACTGACATCTAATCCTGCAATTCAGTATACAGTGTTTGACCAGCTGAAACAACGAGCACTGAAGAATAAACAAAACAACGATGATAAAGCATCCCTTTCTGCATTTATGGCCTTTGTTTTGGGCGCAATTTCCAAGAGTGTGGCTACCTGTTTAACTTATCCGGCCATCAGGTGCAAGGTCATAATTCAATCTGCAAACTCAGAGGAAGCAAACTCCAAAAAAGAGATTATTAAACAAGATAAAACAATCGCTGGAGTACTCTATGGAATCTGGAAAGCAGAGGGCATATTGGGATATTTCAAAGGATTGAAGGCTCAGATCTTAAAAACTGTTTTGAGCTCAGCACTTCTCTTAATGATCAAGGAAAAGATTTCGGCCACCACTTGGGTTCTTATACTCTCACTTAGAAGGTTTCTATTACTCCCTAGGCCTAGGGTAAAAAACCTGTAA 951 0.4448 MMNVDLESLAEATSGAIGSLVSTTILYPLDTCKTKYQAEARSHGGQRYKHLSDVLFEAIANRQVFSLYQGLGTKNLQSFISQFVYFYGYSYFKRLYLEKSGNKSIGTKANLLIAAAAGACTAVATQPLDTASSRMQTSDFGKSKGLLHTLTEGTWSDAFDGLSISLLLTSNPAIQYTVFDQLKQRALKNKQNNDDKASLSAFMAFVLGAISKSVATCLTYPAIRCKVIIQSANSEEANSKKEIIKQDKTIAGVLYGIWKAEGILGYFKGLKAQILKTVLSSALLLMIKEKISATTWVLILSLRRFLLLPRPRVKNL 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181305g00020 316 ProSiteProfiles Solute carrier (Solcar) repeat profile. 6 95 IPR018108 -
Stsc181305g00020 316 ProSiteProfiles Solute carrier (Solcar) repeat profile. 199 294 IPR018108 -
Stsc181305g00020 316 Pfam Mitochondrial carrier protein 199 292 IPR018108 -
Stsc181305g00020 316 Pfam Mitochondrial carrier protein 7 99 IPR018108 -
Stsc181305g00020 316 Pfam Mitochondrial carrier protein 105 189 IPR018108 -
Stsc181305g00020 316 Gene3D Mitochondrial carrier domain 3 295 IPR023395 -
Stsc181305g00020 316 ProSiteProfiles Solute carrier (Solcar) repeat profile. 105 185 IPR018108 -
Stsc181305g00020 316 SUPERFAMILY Mitochondrial carrier 8 290 IPR023395 -
Stsc181305g00020 316 PRINTS Mitochondrial carrier protein signature 68 86 IPR002067 GO:0055085
Stsc181305g00020 316 PRINTS Mitochondrial carrier protein signature 114 136 IPR002067 GO:0055085
Stsc181305g00020 316 PRINTS Mitochondrial carrier protein signature 21 39 IPR002067 GO:0055085
Stsc181305g00020 316 PANTHER PEROXISOMAL ADENINE NUCLEOTIDE TRANSPORTER 1 2 315 IPR045900 GO:0005347|GO:0006635|GO:0015217
Stsc181305g00020 316 FunFam Peroxisomal adenine nucleotide carrier 1 4 295 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181305g00020 Stsc-Chr181305 126178 129258 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181305g00020 24 309 Chloroplast and Mitochondria Gene Families AT1G25380 26.403 1.02e-13 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181305g00020 - - gmx:100787682 504.982