Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181305g00019 ATGATGAACGTGGATCTGGAGTCTCTGGCGGAGGCCACTTCCGGCGCCATTGGATCACTCGTAAGCACCACCATCCTCTACCCTCTCGACACCTGCAAGACAAAGTACCAAGCTGAGGCTCGCTCCCATGGCGGCCAAAGATACAAGCATCTCTCAGATGTGTTATTTGAGGCAATAGCAAACCGCCAGGTGTTTTCGCTTTACCAGGGCCTCGGAACAAAGAATCTCCAGTCCTTCATTTCACAGTTTGTCTACTTCTATGGCTATAGCTATTTTAAAAGACTGTATCTGGAAAAGAGTGGAAACAAGTCCATTGGAACAAAAGCAAACTTGTTAATTGCTGCTGCTGCTGGGGCCTGCACAGCTGTTGCGACTCAGCCCCTGGATACAGCCTCTTCAAGGATGCAGACCAGTGACTTTGGAAAGTCTAAAGGACTATTGCACACCCTTACAGAAGGCACCTGGAGTGATGCTTTCGATGGCCTAAGCATTTCCTTGTTACTGACATCTAATCCTGCAATTCAGTATACAGTGTTTGACCAGCTGAAACAACGAGCACTGAAGAATAAACAAAACAACGATGATAAAGCATCCCTTTCTGCATTTATGGCCTTTGTTTTGGGCGCAATTTCCAAGAGTGTGGCTACCTGTTTAACTTATCCGGCCATCAGGTGA 675 0.4696 MMNVDLESLAEATSGAIGSLVSTTILYPLDTCKTKYQAEARSHGGQRYKHLSDVLFEAIANRQVFSLYQGLGTKNLQSFISQFVYFYGYSYFKRLYLEKSGNKSIGTKANLLIAAAAGACTAVATQPLDTASSRMQTSDFGKSKGLLHTLTEGTWSDAFDGLSISLLLTSNPAIQYTVFDQLKQRALKNKQNNDDKASLSAFMAFVLGAISKSVATCLTYPAIR 224
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181305g00019 224 ProSiteProfiles Solute carrier (Solcar) repeat profile. 6 95 IPR018108 -
Stsc181305g00019 224 ProSiteProfiles Solute carrier (Solcar) repeat profile. 105 185 IPR018108 -
Stsc181305g00019 224 PANTHER PEROXISOMAL ADENINE NUCLEOTIDE TRANSPORTER 1 2 224 IPR045900 GO:0005347|GO:0006635|GO:0015217
Stsc181305g00019 224 PRINTS Mitochondrial carrier protein signature 114 136 IPR002067 GO:0055085
Stsc181305g00019 224 PRINTS Mitochondrial carrier protein signature 68 86 IPR002067 GO:0055085
Stsc181305g00019 224 PRINTS Mitochondrial carrier protein signature 21 39 IPR002067 GO:0055085
Stsc181305g00019 224 SUPERFAMILY Mitochondrial carrier 8 222 IPR023395 -
Stsc181305g00019 224 Gene3D Mitochondrial carrier domain 3 223 IPR023395 -
Stsc181305g00019 224 Pfam Mitochondrial carrier protein 105 189 IPR018108 -
Stsc181305g00019 224 Pfam Mitochondrial carrier protein 7 99 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181305g00019 Stsc-Chr181305 126178 129258 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181305g00019 24 221 Chloroplast and Mitochondria Gene Families AT1G25380 29.245 4.13e-10 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181305g00019 - - gmx:100787682 379.793