Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181302g00017 ATGGAGGAGGAAAGGTCTCACTGGGTTCTCAGTGCTCCTGACCCACCAACCCTCTCCCAACAACTTCTGGCTTCTCTCACCCAAACCTACTCTTCTCTCACCACCCAAACTCTCCCCAACCTACTCCTCTCATTCCTCACTTCCATCTTTCCCGTTCTTCATTGGGGCCGCTACTATAACCTTGCCAAATTCAGCAAGGATTTCCTTGCAGGTCTAACCATTGCAAGTCTATGCATTCCTCAGAGCATTGGGTATGCAACTTTGGCAAAGCTTGATCCTCAGTATGGCCTATATACAAGTGTGGTGCCACCTCTTATATACGCTGTAATGGGAACGTCAAGAGAAGTAGCAATTGGACCCGTGGCGGTGGTATCACTTGTGTTGTCATCAATGATTCAGAAATTGGTTGACCCTGTTTCTGATCCAATTGCTTACAAGAAGCTTGTTTTCACTGCCACCCTCTTTGCTGGTATATACCAGGCTGCCTTTGGAATCTTAAGGTTGGGATTCTTTGTGGATTTTGTGTCCCATGCTGCAATTGTTGGATTCATGGGTGGAGCTGCAATAATAATTGCTCTTCAGCAGCTCAAGGGACTCTTTGGTATCGATCACTTTACCAACAACACTGACTTAATCTCTGTCATCACTTCCCTTGTGGAATCGTTTCATCATCATCCTTGGAACCCTCGCAATCTTATCCTGGGAAGTTCGTTCTTAATTTTCATAGTATTTACCAGATATGTGGGTAAGAGGAATAAGAAGGTGTTTTGGTTGGCGGTAATATCCCCACTAATATCAGTAATATTATCAACTCTTATGGTTTATGTGACACGAGCTGACAAAAGCGGAGTCAACATAGTCAAACATATCAAGGGAGGAGTCAACCCAAGCTCAGTCAATGAGATAGAGTTGAAGAATAGCCCCCATCTTGGAGAATTGGCCAAAATTGGATTAGTTGCTGCTCTTGTAGCACTCACCGAATCGGTTGCTGTTGGTAGATCTTTTGCATCCATGAAAGGATACCACCTTGATGGAAATAAGGAAACGATCTCATTAGGCTTCATGAACATAATTGGATCTTTCACCTCTTGCTATGTTGCAACTGGTTCTTTCTCCCGCACGGTAGTTAATTACAGTGCAGGATGTGAAACATTAGTATCCAACATGGTGATGGCTATTACCGTATTCATATCATTGCAATGCTTTACGAAGCTACTCTACTTTACACCAACCGCAATCCTCGCTTCAATAATTCTCTCAGCTCTCCCTGGACTCATACACATCAATCAAGCCTACACAATTTGGAAGCTTGATAAATTCGATTTTCTTTCTTGCTGCGCAGCTTTCTTCGGAGTCTTATTTTTATCTGTCGAAATTGGTCTTCTTCTCGCGGTGGGGATATCTTTTTCAAGGATCATATTGATATCTATTGGAGGTGGTACAGAAACATTAGGAAGACTTCCCGGTACAGATGTGTTCTGTGATGTGCATCAATATCCTATGGCTCTTAACACTCCTGGGGTTGCAATAATTCGTGTTAAGTCTCCCTTGCTTTGCTTTTCTAATGCCAACTCTGTTAAACAAAGGATCTTGAAACGGATCACTCAGGAAGAAGCAGCACAGGGTAATCAGCAACACACCCCTTTAATTCAGCTAGTAATCATTGACACCTCCAATTTGGTGAGCATTGACACCTCAGGAATTGCTTCTCTAGAGGAGCTTCATGAGAGTCTTGTTTCAAGTGGGAAACAGTTAGCCATTGCCAATCCAAGGTGGCAAGTGATTAACAAGCTAAAGGCTTCCAACTTTGTAAAGAGAATTGGAGGAAGGGTCTTCTTGACTGTTGCAGAGGCTATTGACTGCAAAATGGATTGCTAA 1878 0.4308 MEEERSHWVLSAPDPPTLSQQLLASLTQTYSSLTTQTLPNLLLSFLTSIFPVLHWGRYYNLAKFSKDFLAGLTIASLCIPQSIGYATLAKLDPQYGLYTSVVPPLIYAVMGTSREVAIGPVAVVSLVLSSMIQKLVDPVSDPIAYKKLVFTATLFAGIYQAAFGILRLGFFVDFVSHAAIVGFMGGAAIIIALQQLKGLFGIDHFTNNTDLISVITSLVESFHHHPWNPRNLILGSSFLIFIVFTRYVGKRNKKVFWLAVISPLISVILSTLMVYVTRADKSGVNIVKHIKGGVNPSSVNEIELKNSPHLGELAKIGLVAALVALTESVAVGRSFASMKGYHLDGNKETISLGFMNIIGSFTSCYVATGSFSRTVVNYSAGCETLVSNMVMAITVFISLQCFTKLLYFTPTAILASIILSALPGLIHINQAYTIWKLDKFDFLSCCAAFFGVLFLSVEIGLLLAVGISFSRIILISIGGGTETLGRLPGTDVFCDVHQYPMALNTPGVAIIRVKSPLLCFSNANSVKQRILKRITQEEAAQGNQQHTPLIQLVIIDTSNLVSIDTSGIASLEELHESLVSSGKQLAIANPRWQVINKLKASNFVKRIGGRVFLTVAEAIDCKMDC 625
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181302g00017 625 CDD STAS_SulP_like_sulfate_transporter 499 613 - -
Stsc181302g00017 625 PANTHER SULFATE TRANSPORTER 40 620 IPR001902 GO:0016020|GO:0055085
Stsc181302g00017 625 SUPERFAMILY SpoIIaa-like 505 620 IPR036513 -
Stsc181302g00017 625 Gene3D STAS domain 480 623 IPR036513 -
Stsc181302g00017 625 ProSiteProfiles STAS domain profile. 518 622 IPR002645 -
Stsc181302g00017 625 NCBIfam sulfate permease 51 615 IPR001902 GO:0016020|GO:0055085
Stsc181302g00017 625 Pfam STAS domain 499 618 IPR002645 -
Stsc181302g00017 625 ProSitePatterns SLC26A transporters signature. 93 114 IPR018045 GO:0008271|GO:0008272
Stsc181302g00017 625 Pfam Sulfate permease family 64 447 IPR011547 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181302g00017 Stsc-Chr181302 105755 110266 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181302g00017 2 620 Inorganic Solute Cotransporters AT5G10180 61.722 0.0 810
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181302g00017 K17469 - gmx:100775538 933.71