Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181301g00010 ATGGCAAACAGAAAGTCCAATAAGGTTGCACAAGCAGTAGTTCTGAAGCAGATTCTGAAGAGGTGTTCAAGTTTTGGAAAGAAGCAAAGCTGCAACAATAATAATGATGAAGGGGGTCTCCCTGATGATGTACCAAAAGGTCATTTTGCTGTGTATGTTGGTGAGAACAGGAGCAGGTACATTGTTCCAATATCATGGCTTGATCATCCACGGTTTCAAATTCTGCTCCAAAGGGCTGAAGAGGAGTTTGGTTTCAACCATGTCATGGGACTCACCATTCCTTGTGATGAAGTTGCTTTTCAATCCTTAACCTCAATTATCAGATATTAA 330 0.4091 MANRKSNKVAQAVVLKQILKRCSSFGKKQSCNNNNDEGGLPDDVPKGHFAVYVGENRSRYIVPISWLDHPRFQILLQRAEEEFGFNHVMGLTIPCDEVAFQSLTSIIRY 109
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181301g00010 109 Pfam Auxin responsive protein 16 106 IPR003676 GO:0009733
Stsc181301g00010 109 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 41 106 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181301g00010 Stsc-Chr181301 55583 55912 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181301g00010 5 107 Calmodulin-binding Proteins AT4G34750 44.660 1.45e-23 86.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181301g00010 K14488 - gmx:100798840 178.718