Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181301g00006 ATGAAGCGGGCAAGGAAATCGAAATCGAAATCGAACAGGGTTTCGTGGGCTCCTGCGTCTAATTTGTGTCAGATCAAATTGTTTTTATCGGATGATTGCCCTTCGAAAGTTGGACTGAAATCTCAAGATCATCTTCAAGCAAAGACATCTTCAATGTTGCCTTCAATTATTAATGAACATATGGACCTACCTCCTGGGTTTGAAGACAATCACTTCTTAAACCAGCCAAAGGTTGAACTCTCTCGCATCTTTCCAATTAAATGGCTACGCCCTCCTCTGTTTGCTTTCAGAGATAATTGGCAAGTTGCTGCAGGTGAAGAGAGTAAGGAGAAAATGGATCAAAAGCTAAGAGAAATGAAAGTGCTTGAAGCAGTTTATCCTCGCATTTCTACCATACCTCCCAGCCCTTCTGTTTCACGAGATGTAGAGAAGGAAGGTTATGATGATAACCTCACTCCTCTCATCCCTATCATTCCCATCGAGGAAGAAGATTCAATGGATATTAATCCTGAAGTGGCAGTCACAAAACCCGCAGATACCCCCACTAAATTGCTGTCACAAAACTTGCAGCAATATATAGCAGCTATGACACCCATTAATTCAGAATGCAACACCTCGGCTACTGTTGGCTTATCTGCGAGTGGAAACTCAATGTCGGCGGTTTCTCCTGGTTCGGAGCCAGATTTAGCTGCAGCCTCAGCTCTGGTAGCTGCAGCCATTATGAAGAGTAATGAGCAAGGAAACCCAATTGATATGGATCTGCTTGTTAAAATATTTAATGACCCAATAATGATTGAGAAATTGGTTAACCAACGCGGAACTTCAGCTGCACCCATAACTACCTCTTCAAATACTGGGTTTAAACCTGCTGCTTTTGGGACTAAACCAACAAGCACAGTTGATTTAGTACCTACTGCTCCAAAGCAAGCAGCTTCCTCAGTCTCCATGTTGATGCCTACATCTAATAAGCCAGCAATTCCCCCAGTTCCATTGTCTAGGCCTTCCTCTGGTAATTTAGCTACTAGCTCAGTTACACTGCCTCCACAAGCAACTACGCCATCACCTCCACCTCCACTTCCATCCACTTCTACATTTAATATGCACAGGCCTGTCAACAATAATGTTCATCATGTGACGAATGTAATGCTTCCCTCTTTAGAACCCCAGCCTCCTCAGCAAGATAGAATTCTGTCGTCTGGTATAAAGCGCACGGCACCATTACCTTGTGTGAATTCATCCAGTGAATTGAGCACAGTGCCTTTGAAGTCAACTGCTGTGAATTTTCATGCAGGTGCAAACCAGGTGCGATCAACGGCTGCATCAGTGCCTTATCAAACAAGTAGCACCGGTTCTTCTTTTGCAGTGAAGGATGCCGACTATTATAAGAACCTTATTAGGCAACATGGAGCAGATAAGCAAGATGGTCAGGAATCACTAATAGGTATCCGTCATAATAATTTCCAAGACTTGAAAACGGTAAATAACTTTAAACAAAGGGAAGTGATATTCAAAAACCAGAAACCTTGCATATACTTTAACAGCTCAAGGGGGTGCCGAAATGGTGCAAATTGCCCCTATCAGCACGATATATCAGCTCAGTGGGTAGCTGGTAGTGACCTAGTGGCACAAAATGCAAAAAGAATGAAACTAGGTACAGAAGTTAATGGGAGGATATAA 1677 0.4299 MKRARKSKSKSNRVSWAPASNLCQIKLFLSDDCPSKVGLKSQDHLQAKTSSMLPSIINEHMDLPPGFEDNHFLNQPKVELSRIFPIKWLRPPLFAFRDNWQVAAGEESKEKMDQKLREMKVLEAVYPRISTIPPSPSVSRDVEKEGYDDNLTPLIPIIPIEEEDSMDINPEVAVTKPADTPTKLLSQNLQQYIAAMTPINSECNTSATVGLSASGNSMSAVSPGSEPDLAAASALVAAAIMKSNEQGNPIDMDLLVKIFNDPIMIEKLVNQRGTSAAPITTSSNTGFKPAAFGTKPTSTVDLVPTAPKQAASSVSMLMPTSNKPAIPPVPLSRPSSGNLATSSVTLPPQATTPSPPPPLPSTSTFNMHRPVNNNVHHVTNVMLPSLEPQPPQQDRILSSGIKRTAPLPCVNSSSELSTVPLKSTAVNFHAGANQVRSTAASVPYQTSSTGSSFAVKDADYYKNLIRQHGADKQDGQESLIGIRHNNFQDLKTVNNFKQREVIFKNQKPCIYFNSSRGCRNGANCPYQHDISAQWVAGSDLVAQNAKRMKLGTEVNGRI 558
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181301g00006 558 ProSiteProfiles Zinc finger C3H1-type profile. 503 531 IPR000571 GO:0046872
Stsc181301g00006 558 MobiDBLite consensus disorder prediction 334 348 - -
Stsc181301g00006 558 MobiDBLite consensus disorder prediction 318 362 - -
Stsc181301g00006 558 PANTHER ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 6-RELATED 3 551 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181301g00006 Stsc-Chr181301 34222 39203 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C3H Stsc181301g00006 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181301g00006 - - adu:107488052 904.82