Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181300g00019 ATGGGTGACAATGAAGACTCCAACAACAACAACAACAGTAGTGACATGATGCAAAGGCTTCAATCCTCATTCGGAACGACGTCGTCTTCTTCTTCCTCTTCTTCTTCATTCATCAAGCAGACACTTACGATGGAGCAGCTCACAATACCCCAATTCCAACAACAAATGCATGCTAATAACAATAATCAGCAACAACATTTCTACGGTCTAGATGGAATGAAGCGTGCGGGTATACCACCCTCTCACCCGCACCAGATCCCGCCCATTTCCCCATACTCTCAGATCCCACGCTCCACATTCACTCATCACCAAATGACTTCACCTACACCTACACCCACTCACACCCGATCCCGATCCCAGCCATCCTTCTTCTCACTCGACTCTCTCCCGCCGCTAAGCCCCTCTCCCTTCCGCGGCGGTGATTCCTCTACTTCAATCTCCGACCAAGCCTCCGCTGACGTCTCCATGGAAGATCGTGACGTCAGCAGCCACCACCACCAACAGCAACAGCAGCAACACTCTCTCCTCCCTCCTTCTTCGCCTTTCTCATCTGCCCGGGGCAGCGCCAACCCTCTGCCTCCTCCTCGGAAAACGCATCGTCGCTCCAACAGTGATATACCGTTTGGAATTTCCACGATTTTGCAGTCGTCGCCGCCGCTGATTCCTCTGAAGAAGCCTGCGCAGCTTGTTAAGAAGGAATCTGGTTCTTGGAGTAGCGCTGATCCCAATGCGGAGGGATCAGGGGAGAAGAAGCTCTCCCCTGAAGGTGAAGTTGTTGATGATCTTATCTCTGCTTACATGAACTTGGATAGCATCAATGACGCGTTTAACAATAATTCCTCTGATGAGAAGAATGGCAATGAGATTATCATTAATAATAATAATAATAATAGTAATCGTGATGATTTGGATAGTAGGGCTAGTGGAACCAAGACTAGTAATAACAATGGTGGTGGTGATAGCAGTGATAATGAAGCTGAGAGTAGTGGCAACTCAATGATGAGTCAGAGTTGTGGGGAGAAGAGGGACGGTGTCAAGAAGAGGAGTGCTGCTGGTGAGGTTGTTGGCGGCGGCATGGCTCCCACCAGCCGCCACTATAGGAGTGTGTCTATGGATAGTTTCATTGGCAAGTTGAATTTCAATGATGAGTCACCTAGGTTGCCGCCTTCGCCTGGTTCGGCTCGTCCGCCTTCCTCCAATGGAATTGATGGGAGCACTGGTGCTTTCAGCTTGGAGTTTGGGAATGGTGAGTTTAGTGGGCCTGAGTTGAAGAAGATCATGGCCAATGAGAAGCTTGCTGAGATTGCTATGATGGATCCTAAGCGTGCAAAGAGGATTCTGGCGAATCGGCAATCAGCTGCACGGTCCAAAGAAAGAAAGATGCGATACATTTCCGAGCTGGAGCACAAGGTCCAGACTCTACAAACTGAGGCCACCACACTATCTGCACAGCTTACACTCTTGCAGAGGGATTCTGTTGGACTCGCCAACCAAAATAGTGAGCTCAAATTTCGCCTTCAATCCATGGAACAACAGGCAAAACTCCGAGATGCTCTAAACGAGGCACTTACTGCCGAGGTTCAACGACTAAAGCTCGCCACGGCTGAGCTGAACGGGGATTCACACCAATCTGGTTGCATGATTCCACAACATTCTGTCAACCCTATGATGTTTCAGCAGCAGCAGCAATCTTCTACCACATCTCAACAAAACATTCATCTTCAACAACAGCGGCAGAATGGTAATGCCAACTCACAAACCGATCTAAAACAATAA 1776 0.4887 MGDNEDSNNNNNSSDMMQRLQSSFGTTSSSSSSSSSFIKQTLTMEQLTIPQFQQQMHANNNNQQQHFYGLDGMKRAGIPPSHPHQIPPISPYSQIPRSTFTHHQMTSPTPTPTHTRSRSQPSFFSLDSLPPLSPSPFRGGDSSTSISDQASADVSMEDRDVSSHHHQQQQQQHSLLPPSSPFSSARGSANPLPPPRKTHRRSNSDIPFGISTILQSSPPLIPLKKPAQLVKKESGSWSSADPNAEGSGEKKLSPEGEVVDDLISAYMNLDSINDAFNNNSSDEKNGNEIIINNNNNNSNRDDLDSRASGTKTSNNNGGGDSSDNEAESSGNSMMSQSCGEKRDGVKKRSAAGEVVGGGMAPTSRHYRSVSMDSFIGKLNFNDESPRLPPSPGSARPPSSNGIDGSTGAFSLEFGNGEFSGPELKKIMANEKLAEIAMMDPKRAKRILANRQSAARSKERKMRYISELEHKVQTLQTEATTLSAQLTLLQRDSVGLANQNSELKFRLQSMEQQAKLRDALNEALTAEVQRLKLATAELNGDSHQSGCMIPQHSVNPMMFQQQQQSSTTSQQNIHLQQQRQNGNANSQTDLKQ 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181300g00019 591 SMART brlzneu 437 501 IPR004827 GO:0003700|GO:0006355
Stsc181300g00019 591 Gene3D - 440 492 - -
Stsc181300g00019 591 SUPERFAMILY Leucine zipper domain 441 492 IPR046347 GO:0003700|GO:0006355
Stsc181300g00019 591 PANTHER TRANSCRIPTION FACTOR POSF21-RELATED 170 585 - -
Stsc181300g00019 591 MobiDBLite consensus disorder prediction 167 187 - -
Stsc181300g00019 591 MobiDBLite consensus disorder prediction 558 591 - -
Stsc181300g00019 591 MobiDBLite consensus disorder prediction 232 255 - -
Stsc181300g00019 591 Coils Coil 457 491 - -
Stsc181300g00019 591 MobiDBLite consensus disorder prediction 72 220 - -
Stsc181300g00019 591 MobiDBLite consensus disorder prediction 278 364 - -
Stsc181300g00019 591 MobiDBLite consensus disorder prediction 380 408 - -
Stsc181300g00019 591 MobiDBLite consensus disorder prediction 204 218 - -
Stsc181300g00019 591 Pfam bZIP transcription factor 441 492 IPR004827 GO:0003700|GO:0006355
Stsc181300g00019 591 CDD bZIP_plant_RF2 442 491 IPR044759 GO:0003700|GO:0006355
Stsc181300g00019 591 MobiDBLite consensus disorder prediction 1 38 - -
Stsc181300g00019 591 FunFam probable transcription factor PosF21 440 493 - -
Stsc181300g00019 591 Coils Coil 520 540 - -
Stsc181300g00019 591 MobiDBLite consensus disorder prediction 278 338 - -
Stsc181300g00019 591 MobiDBLite consensus disorder prediction 137 152 - -
Stsc181300g00019 591 MobiDBLite consensus disorder prediction 91 129 - -
Stsc181300g00019 591 ProSiteProfiles Basic-leucine zipper (bZIP) domain profile. 439 502 IPR004827 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181300g00019 Stsc-Chr181300 130487 134471 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181300g00019 1 560 bZIP Transcription Factor Family AT4G38900 52.405 1.52e-156 458
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bZIP Stsc181300g00019 bZIP_1 8.2e-09 CL0018
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181300g00019 - - aip:107628829 845.499