Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181300g00018 ATGTCCGTTACTCNNNNNNNNNNCGGACAGTCCATGCTCAAGAACGTCCAGCCTTTCGTCGCCGGCTACCGCTTCGGTTCCGTCGGCGTCGCTCACAATGGCAATCTCGTAAATTACCGAACCCTGAGGGCAAAACTGGAAGACAACGGTTCCATCTTCAACACCACTTCTGATACCGAGGTCGTTCTTCACCTCATCGCAACTTCCAAGCACAGACCCTTCATTCTCAGAATCGTTGACGCCTGTGAGAAGCTCGAAGGTGCGTATTCAATGGTGTTTCTTACAGAGGACAAGCTTGTTGCTGTTAGGGACCCCTTTGGTTTCAGGCCTTTGGTTATGGGAAGAAGAAGCAACGGTTCTGTTGTCTTTGCTTCTGAAACTTGCGCTCTTGATTTGATTGAAGCTACTTACGAAAGAGAAGTGTACCCTGGCGAGGTTATTGTTGTGGACAACAATGGAGTTCAGAGTCTCTGCCTTATGTCTCATCCTCAACCCAAACAGTGTATATTTGAGCATATTTACTTCGCTTTACCCAATTCTGTTGTTTTTGGTAGGTCGGTTTATGAATCTAGAAGGCAATTTGGTGAGATTCTTGCAACTGAGAGTCCTGTTGATTGTGATGTTGTCATAGCTGTGCCTGATTCCGGTGTTGTCGCGGCGCTTGGTTACGCCGCGAAAGCCGGTGTCCCCTTCCAGCAGGGGCTAATTAGGTCCCACTATGTTGGGAGGACCTTCATTGAGCCTTCTCAGAAGATTAGGGACTTTGGCGTGAAGCTTAAGCTATCGCCGGTTCGCGCGGTTCTAGAAGGGAAGAGAGTTGTGGTGGTGGATGATTCAATTGTGAGAGGAACAACATCATCAAAGATTGTGAGGTTGTTGAAGGAAGCTGGTGCCAAAGAGGTTCACATGAGGATTGCAAGCCCACCAATAATTGGTTCTTGTTACTATGGTGTTGACACTCCAAGCTCTGAGGAGTTGATTTCTAATAGGATGAGTGTTGAGCAGATTAGGGATTTTATTGGTTCTGATTCACTTGCTTTTCTTCCATTTGATAGCTTGAGGAATTTGTTGGGGAAGGAGTCCCCTAATTTCTGTTATGCTTGTTTCTCTGGGAATTACCCTGTTGAGCCAAGAGAACTTAAGGTGAAGAGGGTTGGTGACTTTGTTGATGATGGGTTGAATGGGAGTTTGGAAACCATTGATGGTGGCTGGGTTCAAGCAACAACACCACCACCACCAACAACAAAAGCCCCTAAAGAGGAGAAGGCTGGTACTGTTTTTTGGCAATGA 1290 0.4636 MSVTXXXXGQSMLKNVQPFVAGYRFGSVGVAHNGNLVNYRTLRAKLEDNGSIFNTTSDTEVVLHLIATSKHRPFILRIVDACEKLEGAYSMVFLTEDKLVAVRDPFGFRPLVMGRRSNGSVVFASETCALDLIEATYEREVYPGEVIVVDNNGVQSLCLMSHPQPKQCIFEHIYFALPNSVVFGRSVYESRRQFGEILATESPVDCDVVIAVPDSGVVAALGYAAKAGVPFQQGLIRSHYVGRTFIEPSQKIRDFGVKLKLSPVRAVLEGKRVVVVDDSIVRGTTSSKIVRLLKEAGAKEVHMRIASPPIIGSCYYGVDTPSSEELISNRMSVEQIRDFIGSDSLAFLPFDSLRNLLGKESPNFCYACFSGNYPVEPRELKVKRVGDFVDDGLNGSLETIDGGWVQATTPPPPTTKAPKEEKAGTVFWQ 429
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181300g00018 429 MobiDBLite consensus disorder prediction 403 424 - -
Stsc181300g00018 429 Gene3D - 192 356 IPR029057 -
Stsc181300g00018 429 Pfam Glutamine amidotransferase domain 14 130 IPR017932 -
Stsc181300g00018 429 SUPERFAMILY PRTase-like 168 379 IPR029057 -
Stsc181300g00018 429 PANTHER AMIDOPHOSPHORIBOSYLTRANSFERASE 8 380 - -
Stsc181300g00018 429 ProSiteProfiles Glutamine amidotransferase type 2 domain profile. 1 152 IPR017932 -
Stsc181300g00018 429 NCBIfam amidophosphoribosyltransferase 8 374 IPR005854 GO:0004044|GO:0009113
Stsc181300g00018 429 Gene3D Glutamine Phosphoribosylpyrophosphate, subunit 1, domain 1 14 374 IPR029055 -
Stsc181300g00018 429 SUPERFAMILY N-terminal nucleophile aminohydrolases (Ntn hydrolases) 10 185 IPR029055 -
Stsc181300g00018 429 CDD PRTases_typeI 195 306 IPR000836 -
Stsc181300g00018 429 PIRSF Pur1 3 387 IPR005854 GO:0004044|GO:0009113
Stsc181300g00018 429 Pfam Phosphoribosyl transferase domain 207 302 IPR000836 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181300g00018 Stsc-Chr181300 126054 128289 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181300g00018 9 406 PRT Gene Family AT4G34740 85.176 0.0 704
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181300g00018 K00764 - gmx:100791919 774.237