Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181300g00013 ATGAGGCGGTTCGTGATCCCTATATCGTACCTGAACCAACCTTCTTTTCAAGAACTACTAAACCAAGTAGACGAAGAATTCGGATATGATCATCCGACCGGCGGTCTCACAATACCATGCAATGAGGATGAGTTCCTAAGGCTCACCTCTAAGCTTCAAAATGTTTTGAGTGCTAAGCACATTCTTCGCCGGCAAGTTTCCGCGACATCAATGGAAGTTCCTAAGGGATACTTTGCAGTGTATGTAGGCGAGGGAGAGAAGAAGCGATTCGTGATACCGGTATCAGTTTTGAATCAACCTTCATTTCAAGAACTACTTAGCATGGCAGAGAATGAATTTGGATTCAGCCATCCAATGGGGGGACTTACAATTCCATGCTCAGAAGATGTTTTCATGAGTCTCACATCAACCTTATGCTAG 420 0.4405 MRRFVIPISYLNQPSFQELLNQVDEEFGYDHPTGGLTIPCNEDEFLRLTSKLQNVLSAKHILRRQVSATSMEVPKGYFAVYVGEGEKKRFVIPVSVLNQPSFQELLSMAENEFGFSHPMGGLTIPCSEDVFMSLTSTLC 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181300g00013 139 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 2 52 IPR003676 GO:0009733
Stsc181300g00013 139 Pfam Auxin responsive protein 1 50 IPR003676 GO:0009733
Stsc181300g00013 139 Pfam Auxin responsive protein 64 137 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181300g00013 Stsc-Chr181300 76156 77576 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181300g00013 1 54 Calmodulin-binding Proteins AT3G43120 42.593 1.14e-09 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181300g00013 - K14488 aprc:113865304 196.052