Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181300g00012 ATGCACCTCCTCTTGCCTTTAAAAATAGCACAAGTCATTGGCATCTTCAAGCATCAACATTTAGGCACATTCTTCTTAGAATTGAGAGCTTTGCCTTGTTCTCCTTCTAGTAGACCAATACAAAATATTGGTTTCCGTTTAACTGCTATTCGAAGGGCTTCCTTCTCTGCTAGCCAATCATCTTCAAAATCCTTGGAAGTCCCAAAGGGATGTCTTGCAGTGTATGTTGGAGAGAAACAGAAGTGTTTTCTGATCCCCGTATCGTATTTGAACCAACCATCATTCCAAGACTTGTTGAGTCAAGCCGAGGAAGAATTTGGATATGATCATCCCATGGGTGGTCTCACAATTCCTTGCAGCGAAGATGCTTTTCAACAAATCACTTCTCGCTTGAATAGCCTATAA 405 0.4123 MHLLLPLKIAQVIGIFKHQHLGTFFLELRALPCSPSSRPIQNIGFRLTAIRRASFSASQSSSKSLEVPKGCLAVYVGEKQKCFLIPVSYLNQPSFQDLLSQAEEEFGYDHPMGGLTIPCSEDAFQQITSRLNSL 134
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181300g00012 134 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 59 131 IPR003676 GO:0009733
Stsc181300g00012 134 Pfam Auxin responsive protein 51 130 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181300g00012 Stsc-Chr181300 69381 69785 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181300g00012 43 125 Calmodulin-binding Proteins AT5G20810 44.706 8.01e-16 68.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181300g00012 K14488 - gmx:100816803 140.198