Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181300g00009 ATGGCGACAAGGGTTAGCAAGAGATCACATGGTATTGTCTTCAAGGTCTCTTCTCTTCAAAGAAGAAAGGCATCATTTAGCTCAAACCAAGCAACTTCCAAAGTTGTGGAAGTCCCAAAAGGCTATCTTGCCATGTATGTTGGAGAGAAGATGAAGCGGTTTGTGGTTCCCATTTCTTATTTGAATCAACCTTTATTTCAAGAGTTACTAAGCCAAGCAGAAGAAGAATTTGGATATGATCATCCAATGGGTGGTCTCACTATTCCATGCAGTGAGGATGCTTTCTTGGACCTCACATCTCGCTTAAACTGA 312 0.4135 MATRVSKRSHGIVFKVSSLQRRKASFSSNQATSKVVEVPKGYLAMYVGEKMKRFVVPISYLNQPLFQELLSQAEEEFGYDHPMGGLTIPCSEDAFLDLTSRLN 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181300g00009 103 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 28 102 IPR003676 GO:0009733
Stsc181300g00009 103 Pfam Auxin responsive protein 15 101 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181300g00009 Stsc-Chr181300 50113 51087 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181300g00009 27 95 Calmodulin-binding Proteins AT3G43120 47.826 9.66e-20 77.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181300g00009 K14488 - gmx:100806671 150.599