Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181300g00007 ATGGCTTTCCGCATTCCAGGTATTAGACGGGCCACATCATTTTCTGCATCCAAGGGAACTAATGTTCCAAAAGGCTATCTTGCAGTCTATGTAGGAGATAAGATGAAGCGGTTTGTGATTCCGATATCATACTTGAGTCAACCTTCATTTCAAGAATTACTATGCCAGGTCGAAGAGGAATTCGGATATGATCATCCAACTGGTGGCCTCACAATCCCATGCAGTGAGGATGAGTTCCAAAACCTCACTTCTGAATTAAGTGGACAGTAA 270 0.4296 MAFRIPGIRRATSFSASKGTNVPKGYLAVYVGDKMKRFVIPISYLSQPSFQELLCQVEEEFGYDHPTGGLTIPCSEDEFQNLTSELSGQ 89
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181300g00007 89 Pfam Auxin responsive protein 16 84 IPR003676 GO:0009733
Stsc181300g00007 89 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 15 86 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181300g00007 Stsc-Chr181300 48597 54526 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181300g00007 21 82 Calmodulin-binding Proteins AT3G43120 54.839 5.61e-19 74.3