Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181300g00006 ATGTCAGAAGGTAGGGATGGCAACTATATATACACTTCTTCTTGTGTTCTCAAGCAACACAAATCCGTTGCATCTCCTCTAGTATCAGAACTCACATATTTCTCTATTACAAATCCTTCAAGAACAATGGCTTTTCGCATTCCAAGTATTAGAAAGGCATCACCAAAAGGCACTAATGTTCCAAAAGGCTATCTCGCAGTCTATGTGGGAGATAAGATGAGGCGGTTTGTGATTCCCATATGTTACTTGAACCAACCTTCATTTCAAGAGTTACTAAGTAAAGCAGAAGAAGAATTCGGTTATGATCACCCAGCAGGTGGTCTCACAATTCCATGCAGCGAGGATGCCTTTCTGAACCTCACTTCTCAATTAAGTGGGCAGTAG 384 0.4115 MSEGRDGNYIYTSSCVLKQHKSVASPLVSELTYFSITNPSRTMAFRIPSIRKASPKGTNVPKGYLAVYVGDKMRRFVIPICYLNQPSFQELLSKAEEEFGYDHPAGGLTIPCSEDAFLNLTSQLSGQ 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181300g00006 127 PANTHER SAUR-LIKE AUXIN-RESPONSIVE PROTEIN FAMILY-RELATED 51 124 IPR003676 GO:0009733
Stsc181300g00006 127 Pfam Auxin responsive protein 49 122 IPR003676 GO:0009733
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181300g00006 Stsc-Chr181300 40290 40807 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181300g00006 59 117 Calmodulin-binding Proteins AT3G43120 59.322 8.86e-20 78.2