Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181299g00021 ATGGATTCGCTGCAAAAGGCGCTACTAAGCATAGCCAACTACTTTGAGCTTCAACCGCTACACATGGCTGCCATGCTCTTCGTCCCATTCATGCTGCTGCTAGGTTTAGTCTCTAGAATCCGCACAAGGCCACCGTATCCACCAGGGCCTAAAGGCTTGCCCATCATAGGAAACATGCTTATGATGGAGCAGTTAACCCACCGTGGGCTTGCGAAGCTAGCAAAACAATACGGCGGAATCTTCCACCTGCGCATGGGGTTCCTCCACATGGTGGCGGTTTCCGACCCTGAGTCAGCAAGGCAAGTCCTCCAAGTCCAAGACAACATCTTCTCAAACCGTCCAGCCACCATAGCCATAAGCTACCTAACCTACGACCGCGCCGACATGGCATTCGCCCACTACGGTCCTTTCTGGCGGCAGATGCGTAAGCTGTGCGTCATGAAGCTCTTCAGCCGGAAGCGGCAAGAGTCATGGGAGTCCGTCAGAGACGAAGTGGACAAGGTGGTCCGTTCCGTTGCCTCCAACACCGGAAAATCCATCAACATTGGCGAGCTGGTTTTCAACCTTACGAAGAACATCATCTACCGCGCTGCCTTCGGGTCCAGTTCCCAAGAAGGGCAAGACGAGTTCATCAAGATCCTTCAGGAGTTCTCTAAGCTGTTTGGAGCTTTCAACATCGCAGATTTCATCCCTTTCCTGGGTGGAATCGATCCTCAGGGCCTTAACAAGAGGCTGGTGAAGGCTCGTGGTGCTTTGGACAGTTTCATAGACAAGATCATCGACGAGCATGTTGAGAAGATGAAGAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATGAGTATGAGTGTGAGTCTGATATGGTGGATGAGTTGTTGGCTTTTTACAGCGAGGAAGCCAAGGTGAAGAATGAAGCGGAGGATCTGCAAAACTCTATCAAACTCACAAAGGACAATATCAAAGCCATCATTATGGACGTAATGTTTGGAGGTACAGAGACGGTGGCGTCGGCAATAGAGTGGGCCATGGCAGAGCTCATGAGAAGCCCAGAAGAACTGAAGCGGGTTCAACAGGAGATGGCCCAAGTTGTAGGCCTGGACAGGAGAGTTGAGGAGTCAGACTTGGAGAACCTCACCTACCTCCGATGCGCACTCAAGGAGACCCTCCGCCTCCACCCCCCCATCCCCCTCCTCCTACACGAGACAGCGGAGGATACAACCATCGGAGGATACTTTATCCCCAAGAGAGCGCGCGTCATGATCAACGCCTGGGCCATAGGAAGGGACCCCACCTCCTGGGACGACCCGGAGACCTTCAGGCCCGGGCGATTCTTGAAGAGCGGGGTGGCGGACTTCAAGGGGAGCAACTTCGAGTTCATACCGTTCGGGTCGGGTCGAAGGTCTTGCCCGGGGATGCAGTTGGGGCTGTACGCGCTGGAGGTGGCGGTGGCACATCTGCTCCACTGCTTCACGTGGGAGCTGCCAGATGGGATGAAGCCCAGCGAGATGGACATGGGCGACGTCTTCGGACTCACCGCTCCCAGAGCCACTCGCCTCCACGCTGTTCCCACCAAGCGCCTCCTCTCCCCTCTCTCTTAG 1611 0.5332 MDSLQKALLSIANYFELQPLHMAAMLFVPFMLLLGLVSRIRTRPPYPPGPKGLPIIGNMLMMEQLTHRGLAKLAKQYGGIFHLRMGFLHMVAVSDPESARQVLQVQDNIFSNRPATIAISYLTYDRADMAFAHYGPFWRQMRKLCVMKLFSRKRQESWESVRDEVDKVVRSVASNTGKSINIGELVFNLTKNIIYRAAFGSSSQEGQDEFIKILQEFSKLFGAFNIADFIPFLGGIDPQGLNKRLVKARGALDSFIDKIIDEHVEKMKNNNNNNNNNNNNNNNNEYECESDMVDELLAFYSEEAKVKNEAEDLQNSIKLTKDNIKAIIMDVMFGGTETVASAIEWAMAELMRSPEELKRVQQEMAQVVGLDRRVEESDLENLTYLRCALKETLRLHPPIPLLLHETAEDTTIGGYFIPKRARVMINAWAIGRDPTSWDDPETFRPGRFLKSGVADFKGSNFEFIPFGSGRRSCPGMQLGLYALEVAVAHLLHCFTWELPDGMKPSEMDMGDVFGLTAPRATRLHAVPTKRLLSPLS 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181299g00021 536 CDD CYP71-like 76 523 - -
Stsc181299g00021 536 PANTHER CYTOCHROME P450 84A1-RELATED 20 535 - -
Stsc181299g00021 536 PRINTS E-class P450 group I signature 343 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181299g00021 536 PRINTS E-class P450 group I signature 426 450 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181299g00021 536 PRINTS E-class P450 group I signature 463 473 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181299g00021 536 PRINTS E-class P450 group I signature 98 119 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181299g00021 536 PRINTS E-class P450 group I signature 189 207 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181299g00021 536 PRINTS E-class P450 group I signature 473 496 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181299g00021 536 PRINTS E-class P450 group I signature 386 404 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181299g00021 536 PRINTS E-class P450 group I signature 74 93 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181299g00021 536 PRINTS E-class P450 group I signature 323 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181299g00021 536 Coils Coil 303 323 - -
Stsc181299g00021 536 PRINTS P450 superfamily signature 464 473 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181299g00021 536 PRINTS P450 superfamily signature 387 398 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181299g00021 536 PRINTS P450 superfamily signature 334 351 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181299g00021 536 PRINTS P450 superfamily signature 473 484 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181299g00021 536 SUPERFAMILY Cytochrome P450 47 530 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181299g00021 536 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 466 475 IPR017972 GO:0005506|GO:0016705
Stsc181299g00021 536 Coils Coil 264 289 - -
Stsc181299g00021 536 FunFam Cytochrome P450 84A1 39 529 - -
Stsc181299g00021 536 Pfam Cytochrome P450 47 518 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181299g00021 536 Gene3D Cytochrome P450 40 530 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181299g00021 Stsc-Chr181299 118403 121756 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181299g00021 54 535 Monolignol Biosynthesis Gene Families AT4G36220 77.386 0.0 793
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181299g00021 K09755 - gmx:100783430 842.032