Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181296g00025 ATGCAAGAAAGTGCAGGTCTCTTGCTTGTTCTTTCTCTTGTTCTGTCCAATGCCATTCTTCATGTTTGGAGCCAGGGTACAGGGGAATTACTATTGGCTTGTGGCGATGAATCCGGTGCCAAAGATCTTGATGGAAGGCAATGGAGCCCTGATGGGAAGTACTTATCACAAGGAAGCAGTTCCATCGCTTCCAAAGCCACCTATCAAGACCCTTCTCTAATCTCACAAGTTCCATACATGACTGCAAGAATTTTTGAATCTGAGGCAACATACAAATTTCCTATCCAACCAGACAAGCGCTATTGGCTGAGGCTGCATTTCTACCCTTCTTCCTATGGAAGCCATGACTCTGCTTATTCATATTTCTCTGTCACAGCAAATTCCATCACACTCCTCAGCAATTTCAGCGCCTCAATCACTTGCCTTGCTCTCTCACAGGCTTACATTGATAGGGAGTATTCCCTTGCAGCTCTGGGTTCTGACACCTTGACTCTCACCTTCAGGCCTGCTGATAAGATTGGTGCTTTTGCTTTTGTCAATGGCATTCAACTGATCCAAATGCCAGATCTTTTTGGTTCTGCTTCTATGGTTGGTTTCGACCAAACATTAGATGCTAAGAGCATGCATTTGCAAACAATGTTCAGATTAAACGTTGGTGGAAAATACATCTCTCCTACACAAGATTCTGGCCTAACAAGGATGTGGTATGATGACTATCCTTACCTCTATGGTGCATCCACTGGAATCACCACAACTGCACCAAGTGATGTGAAACTCAACTACCAAAGCATGCCACAGTACACTGCTCCTTCTGATGTCTACCTCACATCAAGATCAATGGGTTCTGACAAGAATCTCAATATGGGCTATAACCTCACATGGATTTTCCAAATTGATCCCAATTCCATGTACCTTGTTAGGATGCATTTCTGTGATTACTATAACAAGGAAGTCAATGAACTTGCTTTCAATGTCTTCCTTAACAGCCAGACGGCAGAAACTGGAGTTGATGTGATTGCAATTGCAGGAGGCAAAGGAATCCCATTATTCAAAGACTTTGTGGTCTATTCTAAAGATGGGGATGGTAGTGACCAGCTTTGGGTTGCTCTGCACCCAAATGATATTACAAAGCCCTCTTACCTTGATGCCATACTCAATGGTCTCGAGATTTTCAAGCTCAGTGACACAGACTTGTCTGGCCCCAATCCTACGCCTTCAGACATGCTCAACAAGTTTGGAAGCCAAGGGGACTTTGGAGAAGTTCACAAACATTTGAATAAGACCATTGTTATTGGTGGCGCCGCGGGTGGCGCAGCTGGTTTTGCCTTGGTGGCTGCCATATGTGTTGCTCTCCATAGGAAGAAGAAATATGCGGGACAACACTCACGCTCAAGCTGGCTCCCTGTACATGGTAACTCATCAGCAACCACCAAATCCTCCATATCTGGTAGGAGCGTGGGTAGCTGCAACCTCACTGCCATGGCTCAAGGTCTTTGCCGTCATTTCTCCTTGCATGAGATGAAGCAAGCAACAAAGAATTTCAATGAGTCCAATGTTATTGGTGTTGGAGGATTCGGAAAGGTCTACAAGGGGACAGTTGATAATGGAACGAAAGTGGCCATTAAGAGATCAAATCCAGAATCTGAGCAAGGAGTTAATGAGTTCCAGACTGAGATTGAGATGCTTTCCAAGCTTAGACATAAGCATTTGGTGTCTCTGATTGGTTTTTGTGAGGAGAATGATGAGATGTGTCTGGTTTATGACTACATGGCTATGGGAACATTCAGGGAACATCTCTACAAGGGAAACAAACGTGTTGGTACCCTTTCATGGAAGCAAAGGTTGGAAATCTGCATTGGAGCTGCAAGGGGGCTTCACTACCTTCACACTGGAGCTAAGTACACCATCATTCATAGAGATGGAAGTTTCGGCTACTTGGATCCTGAATACTTCAGAAGGCAGCAACTGACCGAGAAATCTGATGTGTACTCATTTGGGGTTGTTCTGTGTGAAGCTCTATGTGCTAGGCCTGTTTTGAATCCTAGTCTTCCAAAGGAACAGGTTAGTCTTGCAGAATGGGTACTGCTATGCAAAAGAAGGGGAACACTAGAGGAGATCATTGATCCTTCTTTAAAGGGAAAGATCAACCCAGAAAGCTTGAAGAAGTTTGTAGACACTGCTGAGAAGTGCTTGTCTGATGTCGGAGTCGAACGCCCTTCCATGAATGATCTGTTGTGGAATCTTGAATTTGCTCTCACCCTGCAAGAGAATGGTTCAACTCAATCTTCAGCATCACACAGTAGAGAAAGTGGGTTTGAAGAAATAAGTTTGGACAACAAAGACACAGCAAGCCATAGTAAGAGCCAGAGCCTTGGGGGTCAGAATGAGCCTAGCCAGCAGCAGCAGCAGCAGGATTCTACAATTGATAATTCAGATGATATCTACTCACAATTTGTCAACCTCAATGGCAGATGA 2475 0.4444 MQESAGLLLVLSLVLSNAILHVWSQGTGELLLACGDESGAKDLDGRQWSPDGKYLSQGSSSIASKATYQDPSLISQVPYMTARIFESEATYKFPIQPDKRYWLRLHFYPSSYGSHDSAYSYFSVTANSITLLSNFSASITCLALSQAYIDREYSLAALGSDTLTLTFRPADKIGAFAFVNGIQLIQMPDLFGSASMVGFDQTLDAKSMHLQTMFRLNVGGKYISPTQDSGLTRMWYDDYPYLYGASTGITTTAPSDVKLNYQSMPQYTAPSDVYLTSRSMGSDKNLNMGYNLTWIFQIDPNSMYLVRMHFCDYYNKEVNELAFNVFLNSQTAETGVDVIAIAGGKGIPLFKDFVVYSKDGDGSDQLWVALHPNDITKPSYLDAILNGLEIFKLSDTDLSGPNPTPSDMLNKFGSQGDFGEVHKHLNKTIVIGGAAGGAAGFALVAAICVALHRKKKYAGQHSRSSWLPVHGNSSATTKSSISGRSVGSCNLTAMAQGLCRHFSLHEMKQATKNFNESNVIGVGGFGKVYKGTVDNGTKVAIKRSNPESEQGVNEFQTEIEMLSKLRHKHLVSLIGFCEENDEMCLVYDYMAMGTFREHLYKGNKRVGTLSWKQRLEICIGAARGLHYLHTGAKYTIIHRDGSFGYLDPEYFRRQQLTEKSDVYSFGVVLCEALCARPVLNPSLPKEQVSLAEWVLLCKRRGTLEEIIDPSLKGKINPESLKKFVDTAEKCLSDVGVERPSMNDLLWNLEFALTLQENGSTQSSASHSRESGFEEISLDNKDTASHSKSQSLGGQNEPSQQQQQQDSTIDNSDDIYSQFVNLNGR 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181296g00025 824 ProSiteProfiles Protein kinase domain profile. 514 751 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181296g00025 824 Gene3D Transferase(Phosphotransferase) domain 1 590 640 - -
Stsc181296g00025 824 FunFam FERONIA receptor-like kinase 29 188 - -
Stsc181296g00025 824 FunFam FERONIA receptor-like kinase 208 394 - -
Stsc181296g00025 824 SUPERFAMILY Protein kinase-like (PK-like) 492 751 IPR011009 -
Stsc181296g00025 824 Gene3D Transferase(Phosphotransferase) domain 1 641 754 - -
Stsc181296g00025 824 Gene3D - 30 188 - -
Stsc181296g00025 824 Gene3D - 208 394 - -
Stsc181296g00025 824 FunFam receptor-like protein kinase FERONIA 476 589 - -
Stsc181296g00025 824 Pfam Protein tyrosine and serine/threonine kinase 517 640 IPR001245 GO:0004672|GO:0006468
Stsc181296g00025 824 Gene3D Phosphorylase Kinase; domain 1 488 589 - -
Stsc181296g00025 824 PANTHER OS03G0124300 PROTEIN-RELATED 23 461 IPR046957 GO:0004672
Stsc181296g00025 824 MobiDBLite consensus disorder prediction 782 824 - -
Stsc181296g00025 824 Pfam Malectin-like domain 33 392 IPR024788 -
Stsc181296g00025 824 ProSitePatterns Protein kinases ATP-binding region signature. 520 542 IPR017441 GO:0005524
Stsc181296g00025 824 MobiDBLite consensus disorder prediction 759 824 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181296g00025 Stsc-Chr181296 131161 133743 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181296g00025 27 824 Receptor kinase-like Gene Family AT3G51550 48.237 0.0 735
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_CrRLK1L-1 Stsc181296g00025 Malectin_like 3.8e-37 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181296g00025 - - gmx:102659961 1121.3