Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181295g00008 ATGAATTCAATCTTAAATTACCTAAACACCACCACAATAACTGGAATCTTTTCTCTAATAATCGTACTCTATGTACTTCTCTTTCGTCCCTTCAACAAACATGGTGGTAACCACAAAGAACCTCCCATGGCAGCTGGTGCGTGGCCCATACTGGGTCACCTTCCACTGTTGCGCGGTTCACAGCCACTCCACTTGGCTTTAGGCGCCGTGGCTGACAAATACGGACCCCTTTTCACCATCAAGATCGGCGCCAAGAACACCATAGTACTCAGCAACTGGGAAATGGCCAAAGAATGCTTCACCGCAAACGACATGGTCGTTTCGTCCCGCCCCAAAACCGTTGCTATTGAGAACCTTTCTTACAACTTCGCCGTTTTCGGGTTAGGACCGTACGGTCCATACTGGCGCGAGCTTCGCAAGTTTGCAACGTTAGAGCTTCTCTCGAATCGCCGCATAGAGCTACTAGGCCATGTTCGCGTCTCCGAAGTTCAAACTTCCATTAACGAGCTCTATAATGTTTGGTCCAGCAAGAAAAACAGGAAATATGTATTGGTTGAGTTGAAACAATGGTTTACGCAATTAACCTTCAACACGGTCCTTAGAATGGTCGCCGGAAAGAGATACTTTGGTGATGCTGTGCCGGAGGCTGAAAAGGAAAAGGCGAAGAAGTGTTTAAAAGTAATAGAAGATTTTATGTATTATTTGGGAATATTTACTGTGGGAGATGCTATTCCTGCGTTCAGGTGGATGGATTTGGGAGGCCATGAAAGAGCGATGAAAAAGACTGCTAAGGAATTGGATCAAGTCTTGAATGAATGGTTAGAGGAGCATAAATCAAGTTTCAGTGCAAAGGCTACCAATGAACGTGACTTCATGGATGTTATGATTTCTATTCTCGGAGAAACGAAGATTCATGGATTTGATGCTGATACAATAATCAAAGCCACAACAATGACAATGATAGTGGGTGGAACTGATACATCTGGTGTTACTCTTACATGGACACTATGTTTGTTATTAAATAATCCTCGTACAATGAAAAAGGCCAAAGAAGAACTTGATACTCATATTGGAAAAGAGAGATGCATAACAGAGTCAGATTTAAGCAAATTAGTATATCTTCAAGCTATTGTGAAAGAAGCACTAAGGCTATATCCAGCAGGTCCTCTTGGAGGACCACGTGAGTTCACAGAGAATTGTACTTTGGGTGGCTACCATGTCAAAAAAGGATCTCGACTAATTACAAATATTTGGAAGATTCAAACTGATCCTAGTATTTGGTCAGATCCCTTGGAATTCAAACCAGAGAGGTTCCTCACAACTCACAAAGACACTAATTTTAAGGATCAGCATTTTGAGCTTATGCCATTTGGAAGCGGCAGAAGGATGTGTCCTGGAATGTCGTTTGCCCTTCAAATGGTTCACTTTACTTTGGCCAGATTCTTGCATTCTTTTGAAATTTCAAAACCATCTTCTGATGAACCAATTGATATGAATGGTATCCTTGGGTTGTCTTATGCCAAGGCTACTCCTGTTGAGGTTCTCATCAAGCCTTGTTTGGCTCCGGGTTGTTATGAAACCATGTAA 1587 0.4234 MNSILNYLNTTTITGIFSLIIVLYVLLFRPFNKHGGNHKEPPMAAGAWPILGHLPLLRGSQPLHLALGAVADKYGPLFTIKIGAKNTIVLSNWEMAKECFTANDMVVSSRPKTVAIENLSYNFAVFGLGPYGPYWRELRKFATLELLSNRRIELLGHVRVSEVQTSINELYNVWSSKKNRKYVLVELKQWFTQLTFNTVLRMVAGKRYFGDAVPEAEKEKAKKCLKVIEDFMYYLGIFTVGDAIPAFRWMDLGGHERAMKKTAKELDQVLNEWLEEHKSSFSAKATNERDFMDVMISILGETKIHGFDADTIIKATTMTMIVGGTDTSGVTLTWTLCLLLNNPRTMKKAKEELDTHIGKERCITESDLSKLVYLQAIVKEALRLYPAGPLGGPREFTENCTLGGYHVKKGSRLITNIWKIQTDPSIWSDPLEFKPERFLTTHKDTNFKDQHFELMPFGSGRRMCPGMSFALQMVHFTLARFLHSFEISKPSSDEPIDMNGILGLSYAKATPVEVLIKPCLAPGCYETM 528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181295g00008 528 Gene3D Cytochrome P450 32 519 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181295g00008 528 PRINTS E-class P450 group I signature 194 212 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181295g00008 528 PRINTS E-class P450 group I signature 375 393 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181295g00008 528 PRINTS E-class P450 group I signature 464 487 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181295g00008 528 PRINTS E-class P450 group I signature 332 358 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181295g00008 528 PRINTS E-class P450 group I signature 95 116 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181295g00008 528 PRINTS E-class P450 group I signature 312 329 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181295g00008 528 PRINTS E-class P450 group I signature 416 440 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181295g00008 528 PRINTS E-class P450 group I signature 71 90 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181295g00008 528 PRINTS E-class P450 group I signature 454 464 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181295g00008 528 Pfam Cytochrome P450 45 498 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181295g00008 528 FunFam Cytochrome P450 82C4 31 517 - -
Stsc181295g00008 528 PRINTS P450 superfamily signature 376 387 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181295g00008 528 PRINTS P450 superfamily signature 323 340 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181295g00008 528 PRINTS P450 superfamily signature 455 464 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181295g00008 528 PRINTS P450 superfamily signature 464 475 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181295g00008 528 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 457 466 IPR017972 GO:0005506|GO:0016705
Stsc181295g00008 528 PANTHER CYTOCHROME P450 82C3-RELATED 18 525 - -
Stsc181295g00008 528 CDD CYP82 75 519 - -
Stsc181295g00008 528 SUPERFAMILY Cytochrome P450 47 518 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181295g00008 Stsc-Chr181295 60324 62599 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181295g00008 14 518 Cytochrome P450 AT4G31940 49.709 0.0 535
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181295g00008 - - aip:107643961 897.501