Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181295g00001 ATGGATTCAATCTTAAATTACCAAAACACCACCGCAATAACTGCAATCCTATCTCTAATAATCTTACCTCTTCTACTTCTCTTTCGTCCCTTCAATAAACATGGTGGTAACCACAAAGAACCTCCCATGGCAGCTGGTGCGTGGCCCATACTGGGTCACCTTCCGTTGATGCGCAGTTCACAGCCACTCCACATAACTTTAGCCGCCATGGCTGACAAATACGGATCCCTTTTCACCATCAAGCTTGGCTCCACAAAGACCATAGTACTCAGCAACTCGGAAATGGCCAAAGAATGCTTCACCACAAACGACATGGTCGTTTCGTCTCGCCCCAAGACCGTTGCAATTGAGAACCTTTCTTACAACTTCGCCGTTTTCGGGTTAGGACCGTACGGTCCATACTGGCGCGAGCTTCGCAAGATCGCAACGTTAGAGCTTCTCTCGAATCGCCGCATAGAGCTACTAGGCCATGTTCGCGTGTCTGAAGTTGAAGCTTCCATTAATGAGCTATACAGTGCTTGGTCCAGCAAGAAAAACAAGGAGTCTTATTCTGGTGACGACGGTTATGTGTCGGTGGAGTTGAATCAATGGTTTGCGCAATTGACCTTCAACACGGTTCTTCGAATGGTTGTCGGAAAAAGATACTTTGGTGCTACTGCTGATGAGGAAAAGGCGAAAAAGTGTTTGAAAATAATAGAAGATTTTATGCATCATTTGGGATTATTTACCGTGGGAGATGCTTTTCCTGCGCTAAGGTGGATGGATTTGGAAGGCCATGAAAGAGCCATGAAAAAGACTGCTAAGGAATTGGATCAAGTCTTGAATGAAAGGTTAGAGGAGCATAAAACAAGCTTCAGTGCAAAGGCTACCAATGAACGTGACTTCATGGATGTTATGATTTCTATTCTCGGAGATACAGAGATTCATGGGTTTGATGCTGATACCATAATCAAAGCCACAACAATGTCAATGATCGTGGGAGGAACTGACACAACTGGTGTTGCTCTTACATGGGCAGTATGTTTGTTATTAAATAATCCTCATACATTGAAAAGGGTAAAAGAAGAACTCGATAGTCATATTGGTAAAGAGAGATGCATAATAGAATCAGATTTAAGTAAATTAGTGTATCTCCAAGCTGTAGTGAAAGAGACACTAAGACTATGTCCAACAGGTCCTCTTGGAGGACCTCGTGAATTCACAGAAGATTGCATTGTTGGTGGCTATCGTGTAAAAAAAGGATCTCGACTAATTACAAATATATGGAAGATTCAAACAGATCCTAGTATTTGGCCAGATCCCTTAGAATTCAAACCAGAGAGGTTTCTTACAACTCATAGAGACACTGATGTTAAGGGTCAGCATTTCGAGCTTATACCATTTGGAAGTGGTAGAAGGATGTGTCCCGGAGTGTCTTTTGCCCTTCAAATGATTCACTTTGCTTTGGCTAGATTCTTGCACTCTTTTGAAATTTCAAAACCATCTTCTAATGAACCAATTGATATGACTGGTATCCTTGGGTTGTCCTATGCCAAAGCTACTCCACTTGAGATTCTGATCAAGCCATGTTTGGCTCCTCATTGTTATGATGAAGCCATGTAA 1602 0.4238 MDSILNYQNTTAITAILSLIILPLLLLFRPFNKHGGNHKEPPMAAGAWPILGHLPLMRSSQPLHITLAAMADKYGSLFTIKLGSTKTIVLSNSEMAKECFTTNDMVVSSRPKTVAIENLSYNFAVFGLGPYGPYWRELRKIATLELLSNRRIELLGHVRVSEVEASINELYSAWSSKKNKESYSGDDGYVSVELNQWFAQLTFNTVLRMVVGKRYFGATADEEKAKKCLKIIEDFMHHLGLFTVGDAFPALRWMDLEGHERAMKKTAKELDQVLNERLEEHKTSFSAKATNERDFMDVMISILGDTEIHGFDADTIIKATTMSMIVGGTDTTGVALTWAVCLLLNNPHTLKRVKEELDSHIGKERCIIESDLSKLVYLQAVVKETLRLCPTGPLGGPREFTEDCIVGGYRVKKGSRLITNIWKIQTDPSIWPDPLEFKPERFLTTHRDTDVKGQHFELIPFGSGRRMCPGVSFALQMIHFALARFLHSFEISKPSSNEPIDMTGILGLSYAKATPLEILIKPCLAPHCYDEAM 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181295g00001 533 Coils Coil 256 276 - -
Stsc181295g00001 533 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 461 470 IPR017972 GO:0005506|GO:0016705
Stsc181295g00001 533 Gene3D Cytochrome P450 32 525 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181295g00001 533 CDD CYP82 75 523 - -
Stsc181295g00001 533 FunFam Cytochrome P450 82C4 31 521 - -
Stsc181295g00001 533 PRINTS P450 superfamily signature 468 479 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181295g00001 533 PRINTS P450 superfamily signature 459 468 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181295g00001 533 PRINTS P450 superfamily signature 380 391 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181295g00001 533 PRINTS P450 superfamily signature 327 344 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181295g00001 533 PANTHER CYTOCHROME P450 82C3-RELATED 21 529 - -
Stsc181295g00001 533 SUPERFAMILY Cytochrome P450 47 522 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181295g00001 533 Pfam Cytochrome P450 45 503 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181295g00001 533 PRINTS E-class P450 group I signature 458 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181295g00001 533 PRINTS E-class P450 group I signature 420 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181295g00001 533 PRINTS E-class P450 group I signature 201 219 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181295g00001 533 PRINTS E-class P450 group I signature 71 90 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181295g00001 533 PRINTS E-class P450 group I signature 468 491 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181295g00001 533 PRINTS E-class P450 group I signature 336 362 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181295g00001 533 PRINTS E-class P450 group I signature 95 116 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181295g00001 533 PRINTS E-class P450 group I signature 379 397 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181295g00001 533 PRINTS E-class P450 group I signature 316 333 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181295g00001 Stsc-Chr181295 3405 5608 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181295g00001 42 522 Cytochrome P450 AT4G31940 50.203 3.56e-179 513
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181295g00001 - - aip:107643961 878.241