Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181294g00001 ATGCGACTGAAAACTACACAGTTTTCATTCCTTCTCTTCTTCATACTCATATTCTATACCATTGCTTCTTTCTCTTCTTGTTTAGCTTATAATAATAACGATGAACAACCTGCATTGCTTTCCATAAAAGAAGGCCTCGTTGATCCACTCAACAGTCTCAAAGACTGGAAACTGTACGGTGCAGTTCCAGTTCACCACTGTAGCTGGACTGGTGTATGGTGCAACTCAAATGGATCCGTCGAAAAGCTTGATCTCTCTCACATGAATCTCACCGGCACCGTTTCCAACGCCATAACAAAACTCAAGAGCCTCACTTCTCTCAACTTGTGCTGCAATGGATTCTCCTCATCGCTCTTCAAATCCGTAGTTAGCGTCACCTCACTCAAGTTTCTTGACGTCAGTCAGAATTTCTTAACCGGCGAGTTTCCAATTCCAACGGTTTTTCCTTCTCAGCTTGTGACTCTCAATGCATCAAGCAACAATTTCTCAGGTTTGATTCCGGAGGAGATTGGAAATCTTTCTTCGCTGGAAACACTTGATCTTAGAGGAAGCTTCTTCGAAGGTTCTATTCCGAAATCGTTTGGTGAATTGCGCAGTTTGAAGTATCTCGGACTCTCCGGGAACAATCTCACCGGCGAAATTCCGGCGGAGATCGGAAAATTATCTTCTCTGGAGTTCATGATTATCGGATACAATGAATTCGACGGTGGAGTTCCACCGGAATTCGGTAACCTCACCAATCTAAAGTATCTTGATATAGCAGAGGGGAATCTTGGAGGTGAAATTCCAGCAGAATTGGGGAAACTCAAGCATTTGGAGACTGCTTTCTTGTACAAGAACAGTTTTGGCGGGAAAATTCCGCCGGAAATCGGAAACATGAGTTCTTTAATGTTCTTGGATCTTTCTGATAACATTTTATCTGGAAAGATTCCAGATGAAATCAGTCAGCTCAAGAATCTTCAGCTACTGAATCTGATGCGAAACCGGTTAACCGGTCCGGTCCCGGCTGGCATCGGAGATTTGAATCAGTTGCAGGTTCTTGAGCTTTGGAACAATTCATTGACAGGGACATTGCCTATAAACCTTGGGAAGAATTCATCATTGCAATGGTTAGATGTGTCATCCAACTCACTCTCCGGTGAGATCCCAGAGAATCTTTGCAGCATGGGGAATCTTACAAAGCTTATACTCTTTAATAACGGTTTCTCTGGTCCAATTCCGTCTAGTTTATCGACGTGTTCTTCCCTTGTTCGCGTTCGGATGCACAACAATTTTCTATCAGGGGCGATTCCTGTTGGTTTTGGCAAGCTTAAGAAGCTTCAGAGATTGGAATTGGCTAACAATACTCTCACCGGCGGAATTCCAGAGGACATTGCTTCCTCAACGTCGCTTTCTTTCATTGATTTCTCAAGAAACAAACTCTGTTATTCGCTTCCTTCAATGATTTTCTCCATTATAAATCTTCAGACCTTCATTGTATCCAACAACAACTTGGAAGGCAAAATACCGGACCAGTTGCAGGACTGTCCCTTCCTTGGCGTCCTTGATCTCTCTTCGAATCGATTCTCTGGAAGAATTCCGGCCAGCATTGCCTCGTGTAAGAAATTGGTGAGATTAAGCATGCAGAACAACCGGTTGAATGGAGAAATACCGAAAGCTATGGCGAGCATGCCTACATTGTCCATTCTTGATCTTGCTAACAACTCTCTGACTGGTAAAATACCTGAAAACTTTGGTATGTCGCCGGCTTTGGAAACATTCAATGTTTCATACAATAAGCTAGAAGGCCCTGTCCCTACAAATGGTGAGCTGAGGGCGATTAATCCGAATGATCTCGCGGGCAATGCCGGCCTCTGTGGTGGTGTCCTCCCTCCATGTGGCCAATCCTCCTCATATTGGTCAAGCCATGTTAATTCTCAGACAAAGCATATTGTTCTAGGATGGATCATTGGAGTATCAACAATCTTGGCTATTGCAATTGGGATTTTTGCTGCAAGATCATTATACATGAGATGGTACACCAATGGATTGTGCTTCTTCCCAAAAGGATTTTACAAGGGTAACAAACAGTGGCCGTGGCGATTGATGGCATTTCAGAGGGTAGATTTTACAAGTGCTGATATTCTGTCCTGCATCAAAGATACAAATGTGATTGGAATGGGGGCTACGGGCATTGTCTACAAGGCTGAGATAGCGCAATCAAGTACCGTTGTTGCAGTCAAGAAATTGTGGAGATCAGGATCTGATATTGAAGCGGGAAGTAGCAATGATCTTGTCGGCGAGGTGAATCTTCTAGGGAGGCTAAGGCATCGGAACATTGTTAGGCTATTAGGATTTCTTTATAACGATGCTGATTTGATGATAATTTATGAGTTTATGCACAATGGAAACCTTGGAGATGCCTTGCATGGCAAGCAAGCTGGAAGATTGCTTGTAGATTGGGTTTCAAGGTATAACATTGCTCTGGGAGTTGCGCAAGGGCTCGCATATCTTCACCATGATTGTCATCCGGCGGTCATCCATAGAGACATCAAGTCGAATAACATACTGCTCGACACAAATCTTGAGGCAAGGATAGCTGATTTCGGGTTAGCCAAGATGATGATGCATAAGAATGAGACTGTCTCCATGATTGCTGGATCCTATGGATACATTGCCCCAGAATATGGATACTCATTGAAGGTGGATGAAAAGATAGATATCTACAGCTATGGAGTAGTATTACTAGAGCTTCTAACAGGAAAGAAGCCCTTAGATCCAGAATTTGGAGAATCAATAGACATAGTAGGGTGGATTAGAAGGAAAATAGACAATAAATCCCCAGAAGAAGCATTAGACCCTGGTGTAGGAAGCTCCAAGCATGTTCAAGAAGAGATGCTTTTGGTTCTCAAGATAGCACTTCTTTGCACTGCAAAGCTACCGAAAGATCGACCCTCCATGAGAGATGTGATAATGATGCTTGGAGAGGCAAGGCCAAGGAGGAAGAGTGCTATAAGCAATGAAACTTTTGAGGCTAACAAGGAAATGCAAAATATTAGCACTTCACCAGTTAGTGGTCTTATCTGA 3066 0.4325 MRLKTTQFSFLLFFILIFYTIASFSSCLAYNNNDEQPALLSIKEGLVDPLNSLKDWKLYGAVPVHHCSWTGVWCNSNGSVEKLDLSHMNLTGTVSNAITKLKSLTSLNLCCNGFSSSLFKSVVSVTSLKFLDVSQNFLTGEFPIPTVFPSQLVTLNASSNNFSGLIPEEIGNLSSLETLDLRGSFFEGSIPKSFGELRSLKYLGLSGNNLTGEIPAEIGKLSSLEFMIIGYNEFDGGVPPEFGNLTNLKYLDIAEGNLGGEIPAELGKLKHLETAFLYKNSFGGKIPPEIGNMSSLMFLDLSDNILSGKIPDEISQLKNLQLLNLMRNRLTGPVPAGIGDLNQLQVLELWNNSLTGTLPINLGKNSSLQWLDVSSNSLSGEIPENLCSMGNLTKLILFNNGFSGPIPSSLSTCSSLVRVRMHNNFLSGAIPVGFGKLKKLQRLELANNTLTGGIPEDIASSTSLSFIDFSRNKLCYSLPSMIFSIINLQTFIVSNNNLEGKIPDQLQDCPFLGVLDLSSNRFSGRIPASIASCKKLVRLSMQNNRLNGEIPKAMASMPTLSILDLANNSLTGKIPENFGMSPALETFNVSYNKLEGPVPTNGELRAINPNDLAGNAGLCGGVLPPCGQSSSYWSSHVNSQTKHIVLGWIIGVSTILAIAIGIFAARSLYMRWYTNGLCFFPKGFYKGNKQWPWRLMAFQRVDFTSADILSCIKDTNVIGMGATGIVYKAEIAQSSTVVAVKKLWRSGSDIEAGSSNDLVGEVNLLGRLRHRNIVRLLGFLYNDADLMIIYEFMHNGNLGDALHGKQAGRLLVDWVSRYNIALGVAQGLAYLHHDCHPAVIHRDIKSNNILLDTNLEARIADFGLAKMMMHKNETVSMIAGSYGYIAPEYGYSLKVDEKIDIYSYGVVLLELLTGKKPLDPEFGESIDIVGWIRRKIDNKSPEEALDPGVGSSKHVQEEMLLVLKIALLCTAKLPKDRPSMRDVIMMLGEARPRRKSAISNETFEANKEMQNISTSPVSGLI 1021
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181294g00001 1021 Gene3D Ribonuclease Inhibitor 338 633 IPR032675 -
Stsc181294g00001 1021 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 27 - -
Stsc181294g00001 1021 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 32 184 - -
Stsc181294g00001 1021 Gene3D Transferase(Phosphotransferase) domain 1 797 1015 - -
Stsc181294g00001 1021 Gene3D Ribonuclease Inhibitor 34 147 IPR032675 -
Stsc181294g00001 1021 ProSitePatterns Serine/Threonine protein kinases active-site signature. 839 851 IPR008271 GO:0004672|GO:0006468
Stsc181294g00001 1021 FunFam MDIS1-interacting receptor like kinase 1 712 796 - -
Stsc181294g00001 1021 SMART LRR_typ_2 197 221 IPR003591 -
Stsc181294g00001 1021 SMART LRR_typ_2 341 365 IPR003591 -
Stsc181294g00001 1021 SMART LRR_typ_2 437 461 IPR003591 -
Stsc181294g00001 1021 SMART LRR_typ_2 293 317 IPR003591 -
Stsc181294g00001 1021 SMART LRR_typ_2 366 389 IPR003591 -
Stsc181294g00001 1021 SMART LRR_typ_2 557 580 IPR003591 -
Stsc181294g00001 1021 SUPERFAMILY RNI-like 261 599 - -
Stsc181294g00001 1021 PANTHER RECEPTOR-LIKE PROTEIN 55 437 988 - -
Stsc181294g00001 1021 FunFam MDIS1-interacting receptor like kinase 1 797 1006 - -
Stsc181294g00001 1021 SMART serkin_6 712 987 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181294g00001 1021 Pfam Leucine rich repeat 151 210 IPR001611 GO:0005515
Stsc181294g00001 1021 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 185 285 - -
Stsc181294g00001 1021 Pfam Leucine rich repeat N-terminal domain 33 75 IPR013210 -
Stsc181294g00001 1021 Gene3D Ribonuclease Inhibitor 148 235 IPR032675 -
Stsc181294g00001 1021 Gene3D Ribonuclease Inhibitor 236 337 IPR032675 -
Stsc181294g00001 1021 SUPERFAMILY L domain-like 65 312 - -
Stsc181294g00001 1021 Gene3D Phosphorylase Kinase; domain 1 712 796 - -
Stsc181294g00001 1021 Pfam Protein kinase domain 714 983 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181294g00001 1021 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 368 630 - -
Stsc181294g00001 1021 SUPERFAMILY Protein kinase-like (PK-like) 704 987 IPR011009 -
Stsc181294g00001 1021 ProSitePatterns Protein kinases ATP-binding region signature. 718 742 IPR017441 GO:0005524
Stsc181294g00001 1021 ProSiteProfiles Protein kinase domain profile. 712 1003 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181294g00001 Stsc-Chr181294 13394 16868 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181294g00001 10 1021 Receptor kinase-like Gene Family AT1G08590 58.068 0.0 1125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Stsc181294g00001 Pkinase 3.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181294g00001 - - gmx:100788430 1575.45