Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181293g00023 ATGGTGATCAACGAATCAATGAGGCTATATCCTCCAGCAACTGTGCTACCAAGAATGGCATTTGAAGACATTACATTAGGTGATCTTTTCATCCCTAAAGGCTTATCAGTTTGGATTCCAGTGTTAGCCATTCACCATAGTCAAGAACTCTGGGGTCAAGATGCAAACGAATTCAACCCAGACAGGTTTGCTTCAAAATCATTCATTCCTGGCAGGTTCATACCGTTTGCTTCTGGCCCAAGAAACTGTGTTGGACAATCATTTGCAATGATGGAAGCTAAGATTATATTGTCCATGCTAATTTCTAAGTTTAGCTTCACCATTTCAGATAATTACAGGCATGCCCCTGTCACTGTTCTCACAATTAAACCTAAGTATGGAGTTCAACTTTGTTTCAAGCCATTGGATCCATAA 414 0.401 MVINESMRLYPPATVLPRMAFEDITLGDLFIPKGLSVWIPVLAIHHSQELWGQDANEFNPDRFASKSFIPGRFIPFASGPRNCVGQSFAMMEAKIILSMLISKFSFTISDNYRHAPVTVLTIKPKYGVQLCFKPLDP 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181293g00023 137 Pfam Cytochrome P450 1 112 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181293g00023 137 PANTHER CYTOCHROME P450 FAMILY MEMBER 1 127 - -
Stsc181293g00023 137 SUPERFAMILY Cytochrome P450 1 134 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181293g00023 137 PRINTS P450 superfamily signature 83 94 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181293g00023 137 PRINTS P450 superfamily signature 1 11 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181293g00023 137 PRINTS P450 superfamily signature 74 83 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181293g00023 137 PRINTS E-class P450 group I signature 73 83 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181293g00023 137 PRINTS E-class P450 group I signature 41 65 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181293g00023 137 PRINTS E-class P450 group I signature 83 106 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181293g00023 137 Gene3D Cytochrome P450 1 136 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181293g00023 Stsc-Chr181293 126440 126853 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181293g00023 1 128 Cytochrome P450 AT5G24900 50.758 5.71e-44 147
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181293g00023 K10717 - gmx:100812567 256.529