Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181293g00008 ATGATGATGATGACTACCTCTACATCTGTAGTTAACGTTGTTGTTCTTGTGTTGTTGGGTGTCCAATGTATCTCTGTGGCTTCTCTTGAGTTCCAAGTAGGTGGCTCTAAGGGGTGGGTTGTTCCTCCTTCTAATGACACCAGCATATACAATAACTGGGCTTCCCACAACAGGTTCCAAGTTGGTGACTCCCTCCGTTTCAGGTATAAGAAGGACTCGGTGATGGAGGTGGGTGAGGAAGACTACAAGAAATGCAACTCAACTCACCCAACCTTCTTCTCCAACATCGGCAACACCGAGTTCACGTTCCGACACTCGGGGACATTCTACTTCATCAGCGGCGCCACGGGGCACTGCAAGAAAGGACAGAAGATGGCAATCAGGGTTATGGTTCCAGATGATCATGACCATGACAAGTCTCATGGCTACCATCTTGCAGCTTCACCATTTGCTGGGGTTCCTGGAATAACAATGATCCTCTTATTCCTTCACTTTGTTTTGGATTATGTTGCTTTTGCTTCCTACATGTAG 531 0.4689 MMMMTTSTSVVNVVVLVLLGVQCISVASLEFQVGGSKGWVVPPSNDTSIYNNWASHNRFQVGDSLRFRYKKDSVMEVGEEDYKKCNSTHPTFFSNIGNTEFTFRHSGTFYFISGATGHCKKGQKMAIRVMVPDDHDHDKSHGYHLAASPFAGVPGITMILLFLHFVLDYVAFASYM 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181293g00008 176 FunFam Early nodulin-like protein 1 28 134 - -
Stsc181293g00008 176 ProSiteProfiles Phytocyanin domain profile. 29 131 IPR003245 GO:0009055
Stsc181293g00008 176 SUPERFAMILY Cupredoxins 29 130 IPR008972 -
Stsc181293g00008 176 PANTHER BLUE COPPER PROTEIN 25 136 IPR039391 GO:0009055
Stsc181293g00008 176 CDD OsENODL1_like 30 130 IPR041846 -
Stsc181293g00008 176 Gene3D - 28 133 IPR008972 -
Stsc181293g00008 176 Pfam Plastocyanin-like domain 48 123 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181293g00008 Stsc-Chr181293 30170 30905 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181293g00008 16 166 Phytocyanin Superfamily AT5G14345 47.682 3.53e-44 141
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181293g00008 - - lang:109346935 211.846