Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181292g00029 ATGGCTGCTTCCCTGCTGAGATTACATTTTCATGACTGCTTTGTCAAGGGTTGTGATGGATCAATATTGCTAGATAGCAGTGGAACCATTATCAGCGAGAAGAGGTCGAATCCCAACCGTAATTCGGCTAGAGGATTTGAAGTTGTTGATGAAATCAAATCAGCACTAGAGAAGGAATGCCCTGAGACTGTGTCATGTGCTGACATTTTAGCTATAGCTGCTAGAGATTCAACTGTTCTTACTGGTGGACCAAGCTGGGAAGTGCCTCTAGGCAGAAGGGATTCTCTTGATGCAAGTATAAGTGGCTCCAACTACAACATTCCAGCCCCCAATAACACATTTCAAACCATCCTAACTAAATTCAAGCTCAAGGGCCTTGATATTGTTGATCTAGTTGCTCTATCTGGTAGCCATACTATTGGAGATTCACGGTGTACCAGCTTCAGGCAAAGACTCTACAACCAAACTGGCAATGGCAAAGCAGACTTCACTCTTGACCAATTCTATGCTTCTCAGCTGCGCACTCACTGCCCAAGATCCGGCGGAGACCAGAATCTGTTTGTGCTTGACTTTGTCAGCCCGGCAAAATTCGACAACAGCTACTACAAGAACTTACTGATTAAGAAGGGTTTGTTGAGCTCTGATGAAATTCTCTTGACACAGAATTCAGTGTCTGCAGGTTTAGTGAAGAAGTATGCTGAAAGTAATGAACTTTTCTTTGAACAATTTGCCAAGTCCATGGTTAAGATGGGGAACATTACTCCCTTAACAGGCTCAAGGGGTGAGATCAGAAAGATTTGCAGAAGGGTTAATGCTTAA 819 0.4347 MAASLLRLHFHDCFVKGCDGSILLDSSGTIISEKRSNPNRNSARGFEVVDEIKSALEKECPETVSCADILAIAARDSTVLTGGPSWEVPLGRRDSLDASISGSNYNIPAPNNTFQTILTKFKLKGLDIVDLVALSGSHTIGDSRCTSFRQRLYNQTGNGKADFTLDQFYASQLRTHCPRSGGDQNLFVLDFVSPAKFDNSYYKNLLIKKGLLSSDEILLTQNSVSAGLVKKYAESNELFFEQFAKSMVKMGNITPLTGSRGEIRKICRRVNA 272
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181292g00029 272 SUPERFAMILY Heme-dependent peroxidases 1 271 IPR010255 GO:0004601|GO:0006979|GO:0020037
Stsc181292g00029 272 ProSiteProfiles Plant heme peroxidase family profile. 1 271 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc181292g00029 272 Gene3D - 1 271 - -
Stsc181292g00029 272 PRINTS Haem peroxidase superfamily signature 82 94 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc181292g00029 272 PRINTS Haem peroxidase superfamily signature 64 81 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc181292g00029 272 PRINTS Haem peroxidase superfamily signature 2 16 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc181292g00029 272 PRINTS Haem peroxidase superfamily signature 190 205 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc181292g00029 272 PRINTS Haem peroxidase superfamily signature 130 145 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc181292g00029 272 Pfam Peroxidase 1 235 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc181292g00029 272 ProSitePatterns Peroxidases active site signature. 2 13 IPR019794 GO:0004601
Stsc181292g00029 272 PRINTS Plant peroxidase signature 82 97 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc181292g00029 272 PRINTS Plant peroxidase signature 188 203 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc181292g00029 272 PRINTS Plant peroxidase signature 129 141 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc181292g00029 272 PRINTS Plant peroxidase signature 245 258 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc181292g00029 272 PRINTS Plant peroxidase signature 44 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc181292g00029 272 PRINTS Plant peroxidase signature 63 73 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc181292g00029 272 PRINTS Plant peroxidase signature 4 24 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc181292g00029 272 PRINTS Plant peroxidase signature 204 221 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc181292g00029 272 CDD secretory_peroxidase 1 270 IPR033905 GO:0004601|GO:0042744
Stsc181292g00029 272 ProSitePatterns Peroxidases proximal heme-ligand signature. 130 140 IPR019793 -
Stsc181292g00029 272 FunFam Peroxidase 108 250 - -
Stsc181292g00029 272 PANTHER PEROXIDASE 72-RELATED 1 270 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc181292g00029 272 Gene3D Peroxidase, domain 2 108 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181292g00029 Stsc-Chr181292 133726 135452 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181292g00029 1 271 Peroxidase AT5G66390 80.074 3.85e-166 461
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181292g00029 K00430 - gmx:100788562 491.5