Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181290g00027 ATATTGGTGAGCTTGAAAGTTTTAAAATTTGATGGCAGTGATTCTTTGAAAGAAATACCTGACGTGTCTAGTCTTCAAACTTTACAAGAACTTTCATTCAGAAGTTGTAAAAATCTAGTTACTGTTGACAGTTCAGTTGGTTTTCTACCTAAACTTCAAATATTGAATGCTGAAGATTGCGACAAACTGAGGAATTTTCCACCTGTTATCCAATTGCCCTCACTGGTAGATCTTTATCTATCTGGTTGCTCAAGCCTTGAGTATTTTCCAGAAATTCAACAAGAGATGGAAAATGTTGACCAGCTTAGTTTGACTGACAGTGGCATAAAAGATTTGTCATGTTCATTTCGTAATCTTTCTAGATTGTCCAAGTTGTATTTAATTGGAGATGAAATGTGTAAGATGCCGAGTGTGATTGGCATGATGCCACAACTGTCTGAATGTCATATTATTGGAGGAGGCAATAATAAGGGAATGGTATCAGGAAAGCTAGAGGAAGTGTTTCAAGGAATACTGACTCACTCACTCCCCTCTCAAAATCTAAGAGCTCTTGATCTCATAAACAGCAATTTATCAGATGAGTTTTTTCTGCTAGCTCTTGCATGGTTTCCCAATGTGAAATCGTTAGACCTAAGAGGCAATAATTTCACTGTCCTTCCTGAATGCATTCAACAATTTCACTTTCTAGAAGATCTGCAAGTGGATGATTGCATTTATCTTCGGGAGATTAGAGGGATTCCACCAAACTTGAAATACTTCTCAGCACTAAACTGCAAATCCTTGAGTCCCAGGGGCACACGCGTGTTACTCAATCAGGGATTGTACCAAGGTAGATCGACCGAGTTTTCGATGCCAGGTGAAAGGATTCCAAGGTGGTTTGAGCAGCACCGCAGCGGTGGAACTTCTATTTGTTTCTGGTTTCGTGGCACCGCATTCCCTAAATCTGTTTACATTGCAATTCTACTCCAAGATGACATCCCTTCCCTTAGTGAAGTAGAAATCTTGTTGCACCTCAATGGCAAACAAGTTTCCAGAAAAAATAGCAAAACGGAGCAATTACTTATTTTTAATACGTTTTTATTCCCTAATTTCTTGAAATATGGGGGACATGGACGGGATCCATATGGTGAGAAAGGATGGAATCATGCGGAGGTTGTTGTATATAAAGGACTTGACTATGGCTACGAAAGAGTCCCAAGTGAGTTAATTGTAAAAGAGATTGGAATGCACGTAGTGAAGCAAAAGGATGGTAGTATAATTGAAGATATTCGATTTACTGATCCTTACAAAATGGCAGAACTAATTATAATGATGATGATGGTGTCAATAGTATTCCCCAACCATAAGAAGCAGCCCTTGCTCCTGGAAACATGCATTGGTTTGTGGACATTGCTCTTTCTAACACACTCCTTTTGGTCGGCAGCACAAGAGAAGAAGCCACGTCGAGGCCCCAATTCTGGTTTGATTTGCATTAGTCCATGCTGCCAATGA 1491 0.3964 ILVSLKVLKFDGSDSLKEIPDVSSLQTLQELSFRSCKNLVTVDSSVGFLPKLQILNAEDCDKLRNFPPVIQLPSLVDLYLSGCSSLEYFPEIQQEMENVDQLSLTDSGIKDLSCSFRNLSRLSKLYLIGDEMCKMPSVIGMMPQLSECHIIGGGNNKGMVSGKLEEVFQGILTHSLPSQNLRALDLINSNLSDEFFLLALAWFPNVKSLDLRGNNFTVLPECIQQFHFLEDLQVDDCIYLREIRGIPPNLKYFSALNCKSLSPRGTRVLLNQGLYQGRSTEFSMPGERIPRWFEQHRSGGTSICFWFRGTAFPKSVYIAILLQDDIPSLSEVEILLHLNGKQVSRKNSKTEQLLIFNTFLFPNFLKYGGHGRDPYGEKGWNHAEVVVYKGLDYGYERVPSELIVKEIGMHVVKQKDGSIIEDIRFTDPYKMAELIIMMMMVSIVFPNHKKQPLLLETCIGLWTLLFLTHSFWSAAQEKKPRRGPNSGLICISPCCQ 496
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181290g00027 496 Gene3D Ribonuclease Inhibitor 2 93 IPR032675 -
Stsc181290g00027 496 SUPERFAMILY L domain-like 2 262 - -
Stsc181290g00027 496 Gene3D Ribonuclease Inhibitor 94 267 IPR032675 -
Stsc181290g00027 496 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 4 261 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181290g00027 Stsc-Chr181290 169906 171658 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181290g00027 2 171 WRKY Transcription Factor Family AT4G12020 31.285 1.96e-08 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181290g00027 - - ahf:112751488 541.191