Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181290g00026 ATGGCTCTGCACTTCTCCTTCTCATCGTCTACCCGTCCCTTTTCCTCTTCTTCTTCCATCAGCTATTCATGGAAATATGACGTGTTCATTAGCTTTAGAGGTGAAGATACTCGCTACGGTTTTACTGGCTATCTTTATGATGCTCTTTGTAAGAAAGGAATCCACACGTTCATTGATGATGAGGAGCTTCAAAAAGGGGAAGAAATCACACCCTCACTTTTCAGCTCAATTCAAGAGTCCAGGATTGGCATCATTGTGCTCTCTCCTAACTATGCTTCATCTTCTTTCTGCTTAGATGAGCTTGTCGAGGTCCTTCGCTGCATCAAGGGAAATAATCGGTTGGTTTTGCCGGTTTTCTATAAGGTTCATCCTTCTGATGTGCGCCATCAAAGAAACTGTTTCAGAGAAGCAATGGCTAAACATAAGAAGAGATTCAAGAATGACTTTAACAAGCTGCACAAATGGAAGGAGGCTCTGCATCAAGTGGCTAATTTGTCCGGCTATCATTTTAAAGATGGGGTTGGATATGAACATAAGTTAATTAAAAATATTGTGGAAGACATTTCAAGAAAGGTTAGGCGTGTGCCTTTGCCAGTTGCTGATTACCCTGTTGGACTAGAGTCTCGAGTATCAGAAGTAATTTCACTTTTGGAAATTGAATCTGATGATGCAGTTCATATGGTAGGAATACATGGCATTGGTGGAATAGGAAAAACAACACTTGCTCTTGCAGTTTTTAACTTGATTGCAGACCATTTTGAATGTGTGTGCTTTCTTGAAAACATGAGAGAAAATTCAAATAAATATGGGTTGGTACATTTTCAAAATATCCTTCTTCGTAAGATGTTAGGGAAAGAGGGAGTCCAGATAGACGGTGTTAAAGAAGGAACCTCACAGATACAACAAAGGCTTTGTCGAAAGAGAGTTCTTTTGATTCTAGATGATGTTGATGAACAAGAGCAGTTAAAATCTATTGCTGGAAAACCTGATTGGTTTGGCGGTGGTAGTAGAGTCATAATTACAACACGGGATACACATTTGCTAAAACTCCATGGTGTTGAAAGGACATATGATGTACAATGTTTAAATGAGGAAGAATCCTTAAATTTGCTTATGTGGAAAACTTTTAAAAGTGATACTATTATCCCAAGTTATGCAGATGTTTTAAATCGTGCAATAACTTATGCCTCTGGGCATCCACTGGCTTTGGAATTAATAGGCTCCAACTTGTTTGGAAAAGAAGTACAGGTTTGGGAATCTGCTTTGGATCAATTTGAAAAACATCTTGATCATAAAATACATAAGATATTTCGAGTAAGTTTTGATGCTTTGGGAGAACAAGAGCAAATTGTTTTTCTTGATATTGCCTGTTGTTTTAAAGGATATACATCAAAGGAACTTAGTGATCTACTTGAAGCTCATTATGGGCGTTCCATGAAATATCATATTGAAGTGCTAGTTCAAAAATCTCTCATAAAGATCAATCATCATTATAAGGTGACAATGCATGACTTGATAGAGGACATGGGCAAAGAAATTGATAATCTAGAAAAATCAGCTGAAATGCCTGGGAAGTGTAGAAGATTATGGTACTATAAAGACGTAGTTAAAGTTTTAGAAGACAATCAAGGGACTAGCGTCACTGAAATCATATATCTAGAAGTTCCCTCATTTGAAGTGAAAGGAGATGAAGATCCATTTAAAAAAGAGGGAAATAAAGATGTAGCAGTGAAATGGGATGGAACAGCTTTTAAAGAGATGAAAAACCTGAAAACACTTATCATAAAAAATGGTTGTTTTTCTGAAAGACCCAAACATCTTCCAAAGAGTTTAAGAGTATTGGAATGGCAGAAATATCCTTCAGAGTATTTTCCACTTGATTTTCAACCAGAGATGCTCTGCATACTCAAGTTACCTGATTATGTCTACCCATCACCCAAGTTAGATAGCATATCCAAGAAATTAGTGAGCCTGAAAGTTTTGAAATTTAATGGCAGCAATTCTTTGAAAGAAATACCTGATGTGTCTAGTCTTCATTCTTTACAAGAATTATCTTTCAAAGGATGTAGAAATTTAGTTACAGTTGACAATTCAGTTGGTTTTCTACCCAAACTTAAAATATTGAATGCTGAAGATTGCGACAAACTGAGTTATTTTCCACCTGTTATCCAATTGCCCTCACTGGAAGCTCTTTTTCTATCTGGTTGCTCAAGTCTTGAGTATTTTCCAGAAATTCAACAAGAGATTGAAAAAGTTAAATCGCTTGATTTAAGTAACGTCGGCATAAAAGATTTGCCATGTTCATTTCGTAATCTTTCTAGATTGCGGGATTTGTATTTAAATGGAAGTGAAATGTGTAAGATGCCAAGTGTCATTACCATGATGCAACAACTGTCTTCCTGTGATATTAAGGGAGGAGGCAACAATAAGGGAAGGGTATCAGGAAAGCTGGAGGAAGGGTTTCAAGGAATGCTCACTCGCTTACTCCCCTCTGAAAATCTAACTTCTCTTTTTCTTGAAAACACCAATTTGTCAGATGAGTTTTTTCCGTTAGCTGTTGCATGGTTTCCCAATGTGGAATGGTTAGACCTAAGAGGCAATAATTTCACATCCCTTCCTGAATGCGTCCAACAATTTCGCTTTCTAAGAAAACTCACAGTGAATGATTGCACGCATCTTCGGGAGATTAGAGGAATTCCACCAAACTTGGAATACTTCTCAGCAGTAAACTGCAAATCCTTGAGTCCCAGGACCAAACACTTGTTACTCAATCAGGGATGGTACGAGGATAGATCGACCACCTTTTTGATTCCAGGTGAAAGGATTCCAAGGTGGTTTGAGCAGCGCTGCAGCGGCGGAACTTGTATTTATTTCTGGTTTCGTGGCACCATATTCCCTGCCAAATCTCTTTGCGTTGCATTTCTACTCAATGATCACATCCCTTCCCTTAGTCGAAAGGATGGAATCGTGCACTACCAGAATGTGAAGAAGGATGGAATCTTGCGGATGTTTCATTTGTAG 3021 0.3803 MALHFSFSSSTRPFSSSSSISYSWKYDVFISFRGEDTRYGFTGYLYDALCKKGIHTFIDDEELQKGEEITPSLFSSIQESRIGIIVLSPNYASSSFCLDELVEVLRCIKGNNRLVLPVFYKVHPSDVRHQRNCFREAMAKHKKRFKNDFNKLHKWKEALHQVANLSGYHFKDGVGYEHKLIKNIVEDISRKVRRVPLPVADYPVGLESRVSEVISLLEIESDDAVHMVGIHGIGGIGKTTLALAVFNLIADHFECVCFLENMRENSNKYGLVHFQNILLRKMLGKEGVQIDGVKEGTSQIQQRLCRKRVLLILDDVDEQEQLKSIAGKPDWFGGGSRVIITTRDTHLLKLHGVERTYDVQCLNEEESLNLLMWKTFKSDTIIPSYADVLNRAITYASGHPLALELIGSNLFGKEVQVWESALDQFEKHLDHKIHKIFRVSFDALGEQEQIVFLDIACCFKGYTSKELSDLLEAHYGRSMKYHIEVLVQKSLIKINHHYKVTMHDLIEDMGKEIDNLEKSAEMPGKCRRLWYYKDVVKVLEDNQGTSVTEIIYLEVPSFEVKGDEDPFKKEGNKDVAVKWDGTAFKEMKNLKTLIIKNGCFSERPKHLPKSLRVLEWQKYPSEYFPLDFQPEMLCILKLPDYVYPSPKLDSISKKLVSLKVLKFNGSNSLKEIPDVSSLHSLQELSFKGCRNLVTVDNSVGFLPKLKILNAEDCDKLSYFPPVIQLPSLEALFLSGCSSLEYFPEIQQEIEKVKSLDLSNVGIKDLPCSFRNLSRLRDLYLNGSEMCKMPSVITMMQQLSSCDIKGGGNNKGRVSGKLEEGFQGMLTRLLPSENLTSLFLENTNLSDEFFPLAVAWFPNVEWLDLRGNNFTSLPECVQQFRFLRKLTVNDCTHLREIRGIPPNLEYFSAVNCKSLSPRTKHLLLNQGWYEDRSTTFLIPGERIPRWFEQRCSGGTCIYFWFRGTIFPAKSLCVAFLLNDHIPSLSRKDGIVHYQNVKKDGILRMFHL 1006
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181290g00026 1006 PRINTS Disease resistance protein signature 227 242 - -
Stsc181290g00026 1006 PRINTS Disease resistance protein signature 396 410 - -
Stsc181290g00026 1006 PRINTS Disease resistance protein signature 723 739 - -
Stsc181290g00026 1006 PRINTS Disease resistance protein signature 303 317 - -
Stsc181290g00026 1006 FunFam Disease resistance protein (TIR-NBS-LRR class) 22 194 - -
Stsc181290g00026 1006 Gene3D - 190 354 IPR027417 -
Stsc181290g00026 1006 Gene3D - 361 445 IPR042197 -
Stsc181290g00026 1006 Gene3D Ribonuclease Inhibitor 581 747 IPR032675 -
Stsc181290g00026 1006 Gene3D Ribonuclease Inhibitor 748 923 IPR032675 -
Stsc181290g00026 1006 Gene3D - 19 189 IPR035897 -
Stsc181290g00026 1006 SMART AAA_5 224 362 IPR003593 GO:0016887
Stsc181290g00026 1006 SUPERFAMILY "Winged helix" DNA-binding domain 432 540 IPR036390 -
Stsc181290g00026 1006 ProSiteProfiles TIR domain profile. 24 192 IPR000157 GO:0007165
Stsc181290g00026 1006 Pfam NB-ARC domain 208 443 IPR002182 GO:0043531
Stsc181290g00026 1006 Pfam TIR domain 25 192 IPR000157 GO:0007165
Stsc181290g00026 1006 SUPERFAMILY Toll/Interleukin receptor TIR domain 15 168 IPR035897 -
Stsc181290g00026 1006 SUPERFAMILY L domain-like 578 915 - -
Stsc181290g00026 1006 SMART till_3 25 165 IPR000157 GO:0007165
Stsc181290g00026 1006 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 191 455 IPR027417 -
Stsc181290g00026 1006 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 26 801 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181290g00026 Stsc-Chr181290 157111 161474 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181290g00026 21 805 WRKY Transcription Factor Family AT4G12020 30.893 1.81e-78 280
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181290g00026 - - aip:107644584 1258.82