Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc181290g00025 | ATGGGTCAGCAATACTCCTCCTCCTCTGCCCATCCCTTTTCCTCCTTCAGCTATGCATGGAAATATGATGTGTTTATTAGTTTCAGAGGCGAAGATACTCGCTACAGTTTTACTGGCTATCTTTATGATGCTCTTTGTAAGAAAGGAATCCACACCTTCATTGATGATGAGGAGCTTCCAAAAGGAGATGAAATCACACCCTCACTTCTCAGCTCAATTCAAGAGTCTAGGATTGCCATCATTGTCCTCTCCACTAACTATGCTTCTTCTTCTTTTTGCTTAGATGAGCTTGTCCACATCCTTCACTGCATCAAGGGAAATAATCGGTTGGTTCTGCCGGTTTTCTATAATGTTGATCCTTCTGATGTTCGCCATCTGAGAAAGAGTTTCGAAACAGCAATTGCGAAGCATGAGAAGAGATGCAAGGATGACATGAACAACAAGGTGGATAAATGGAAGAAGGCTCTCCATCAAGTAGCTAATTTATCTGGCTACCATTTCAAACATGGGGATGGATATGAACATAAGTTTATTACAAATATCGCGGAAGACATTTCAAGAAAGATAAGCCGTGTACCTTTGCCAGTTGCTAACTACCCTGTTGGACTAGAGTCTCGAGTGTCACCAGTAATTTCACTTTTGGAAATGGATTCTTGTGATCAAGTTCACATGGTAGGGATACATGGAATTGGTGGCATAGGAAAAACAACTCTTGCTATTGCTGTTTATAACTTGATTGCTGATCATTTTGAAGATGTGTGCTTTCTTGAAAACGTGAGAGAAAATTCAAGTAAATATGGCTTGGTACATCTTCAAAATAATCTTCTTTGTAAGTTATTAGGGAAAGAAGGAGTCCAGATAAAGGGTGTTAAAGAAGGAACCTCACAGATACAACAAAGGCTTTGTCGAAAGAAGCTTCTTTTGGTTCTGGATGACGTTGATGATCTCATGCAGCTACAAGCTATTGCTGGAAAACTTGATTGGTTTGGTCGGGGTAGCAGAGTTATTATTACAACACGAGACACACATTTACTAAAGTGTCATGGTGTTGAAAAAGCATATGAGGACATACATTAG | 1077 | 0.3983 | MGQQYSSSSAHPFSSFSYAWKYDVFISFRGEDTRYSFTGYLYDALCKKGIHTFIDDEELPKGDEITPSLLSSIQESRIAIIVLSTNYASSSFCLDELVHILHCIKGNNRLVLPVFYNVDPSDVRHLRKSFETAIAKHEKRCKDDMNNKVDKWKKALHQVANLSGYHFKHGDGYEHKFITNIAEDISRKISRVPLPVANYPVGLESRVSPVISLLEMDSCDQVHMVGIHGIGGIGKTTLAIAVYNLIADHFEDVCFLENVRENSSKYGLVHLQNNLLCKLLGKEGVQIKGVKEGTSQIQQRLCRKKLLLVLDDVDDLMQLQAIAGKLDWFGRGSRVIITTRDTHLLKCHGVEKAYEDIH | 358 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc181290g00025 | 358 | Gene3D | - | 192 | 354 | IPR027417 | - | |
Stsc181290g00025 | 358 | FunFam | Disease resistance protein (TIR-NBS-LRR class) | 18 | 191 | - | - | |
Stsc181290g00025 | 358 | SUPERFAMILY | P-loop containing nucleoside triphosphate hydrolases | 191 | 350 | IPR027417 | - | |
Stsc181290g00025 | 358 | PRINTS | Disease resistance protein signature | 300 | 314 | - | - | |
Stsc181290g00025 | 358 | PRINTS | Disease resistance protein signature | 224 | 239 | - | - | |
Stsc181290g00025 | 358 | Gene3D | - | 16 | 191 | IPR035897 | - | |
Stsc181290g00025 | 358 | PANTHER | LEUCINE-RICH REPEAT-CONTAINING PROTEIN | 22 | 346 | IPR044974 | GO:0006952 | |
Stsc181290g00025 | 358 | Pfam | TIR domain | 21 | 189 | IPR000157 | GO:0007165 | |
Stsc181290g00025 | 358 | ProSiteProfiles | TIR domain profile. | 20 | 189 | IPR000157 | GO:0007165 | |
Stsc181290g00025 | 358 | SMART | till_3 | 21 | 162 | IPR000157 | GO:0007165 | |
Stsc181290g00025 | 358 | Pfam | NB-ARC domain | 211 | 350 | IPR002182 | GO:0043531 | |
Stsc181290g00025 | 358 | SUPERFAMILY | Toll/Interleukin receptor TIR domain | 14 | 165 | IPR035897 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Stsc181290g00025 | Stsc-Chr181290 | 153734 | 155222 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc181290g00025 | 10 | 355 | WRKY Transcription Factor Family | AT4G12020 | 28.000 | 2.52e-35 | 135 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc181290g00025 | - | - | aip:110272157 | 524.628 |