Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181290g00022 ATGGCTAAGCATGAGAAAAGATACAAGGATGACATTAACAAGGTGGACAAATGGAAGAAGGCACTCCATCAATTAGCTAATTTGTCCGGTTATCATTACAAACATGGGGATGGATATGAACGTAAGTTTATTGAAAAGATCGTGCAAGACATTTCGAGAAAGGTAAGCCGTGTACCTTTGCCGGTGGCTGACTACCCTGTCGGACTAGAGTCTCGGGTGCCAGAAGTAATTTCACTTTTGGAAATGGATTCTAGTGATCGAGTTCACATGGTAGGGATACATGGAATCGGTGGCATAGGTAAAACAACACTTGCTCTTGCTGTTTATAACTTGATTGCTGACCATTTTGAAGCTGTGTGCTTTCTTGAAGACGTGAGAGAACATTCAGAAGAACCTGGGGGGTTGGTGAATCTTCAAAAAGATTTTCTTTGTAAGATATTAGGGAAGGAGGGAGTCCACATAATAGGTGTTAGGGATGGAATTTCACAGATACAACGTAGACTCAGCCAAATGAAAATTCTTTTGGTTTTGGATGACGTTGATGAAGAAGAGCAGTTAAAAGCTATTGCTGGAAACCTGATTGGTTTGGTCGTGGCAGCAGAATCCTTATTACGACAAAGAACAAACGATTGCTGA 636 0.4119 MAKHEKRYKDDINKVDKWKKALHQLANLSGYHYKHGDGYERKFIEKIVQDISRKVSRVPLPVADYPVGLESRVPEVISLLEMDSSDRVHMVGIHGIGGIGKTTLALAVYNLIADHFEAVCFLEDVREHSEEPGGLVNLQKDFLCKILGKEGVHIIGVRDGISQIQRRLSQMKILLVLDDVDEEEQLKAIAGNLIGLVVAAESLLRQRTNDC 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181290g00022 211 Gene3D - 1 54 IPR035897 -
Stsc181290g00022 211 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 56 191 IPR027417 -
Stsc181290g00022 211 Gene3D - 55 206 IPR027417 -
Stsc181290g00022 211 Pfam NB-ARC domain 73 189 IPR002182 GO:0043531
Stsc181290g00022 211 PRINTS Disease resistance protein signature 90 105 - -
Stsc181290g00022 211 PRINTS Disease resistance protein signature 167 181 - -
Stsc181290g00022 211 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 14 191 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181290g00022 Stsc-Chr181290 124733 126046 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181290g00022 4 193 WRKY Transcription Factor Family AT4G12020 33.161 3.47e-16 75.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181290g00022 - - aip:110272157 282.722