Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181290g00020 ATGACAAACCTGAAAACACTTATTATAAAAAATGGTTGTTTTTCCGAAAGTCCCAAACATCTTCCAAAGAGTTTAAGAGTATTGGAATGGTGGAAATATCCTTCAGAGAATTTTCCAAGTGATTTTCAACCAGAGATGCTCTGCATACTCAAGTTACCCAATTATGTCTACCCATCACCCAAGTTGGATAGCTTATCCAAGAAATTGGTGAGCTTGAAAGTTTTGACATTTGATGAGAGTGATTATTTGAAAGAAATACCTGATCTGTCTAGTCTTCAAACTTTACAAGAACTTTCATTTAGATGGTGTACAAGTTTAACTACCATTGACAGTTCAGTTGGCTTTCTACCTAAACTTACAAGGTTAAATGCTAATCATTGCGACAAACTGAGGAATTTTCCACCTGTTATCCAATTGCCCTCATTAGAACATCTCAATCTATTTGGTTGCACAAGCCTTGAGTATTTTCCAGAAATTGAAGGAGAGATGAAAAATGTTACACGGCTTCATTTGCTTTGCACTGGCATAAAAGATTTGCCATTCTCATTTCGTAATCTTTCTGGATTGTGGAATTTGTGTTTAAGCGGACATGAAATGTGTAAGTTGCCAAGTGTGATTGGCATGATGCCACAACTGTTATACTGTTATATTGAGGGAAGAGGCAACAAGGGAAGGATATCAAGAAAGGTGGAGGAAGGTTTTCAAGGAATACTGACTCACTCACTCCCCTCTCAAAATCTAGGATCTCTTCATCTCATAAACAGCAATTTGTCAGATGAATTTTTTCAGCTAGCTCTAGCATGGTTTCCCAATGTGAAATGGTTAGACCTAAGAGGCAATAATTTCACTGTGCTTCCTGAATGCATTCAACAATTTCACTTTCTAGAAAAACTGATAGTGGATGATTGCCTTTATCTTCGGGAGATTAGAGGGCTTCCACTAAACTTGAAAAAGTTCTCAGCAGTAAATTGCAAATCCTTGAGTCCCAGGGCCAAAAGCTTGTTAGCCAATCAGGGATTGCACGAGGGTAGATCGACCTCCTTTTTGATGCCAGTTGGAACGATTCCAAGGTGGTTTGAGCAGCGCCGCAGCGGTGGAACTTGTATTTCATTCTGGTTTCGTGGCACCAAATTCCCTGCCAAATCTCTTTGTGTTGCAATTCTACTCAAGGATCACATCCCTTCCCTTCGTGAAGTTAAAACCTTCTTGTGCATCAATGGCAAAGTAACTTCCCTGGATAATACCGGAGTGGAGCAATTACTCATTTTTAATATGAATTCACTCCTTAGTTGCTGCCCACCACTTGGTGAACATGGATGGAATCATGCGGAGGTTGTTGTAGTTGAAGGACGTGACAATGACGACAAAAAGGTCCCAAGTGAGTTAATAGTAAAAGAGATTGGAATGCACGTAGTGAAGCAAAATGATACTAGTATAATTCAAGATATTCGATTCACTGATCCTTACAAAATGACACAAGTGATTATGATGATGATGATGCTCTCAAAAGTATTGCCCAACCATAAGAGGCAACCTCTGCTCCTGGAGACATGCATAGGTTTGTGGACATTGCTCTTTCTAACACACACTCTTTCAGGCACCCATACTGAATGA 1614 0.3953 MTNLKTLIIKNGCFSESPKHLPKSLRVLEWWKYPSENFPSDFQPEMLCILKLPNYVYPSPKLDSLSKKLVSLKVLTFDESDYLKEIPDLSSLQTLQELSFRWCTSLTTIDSSVGFLPKLTRLNANHCDKLRNFPPVIQLPSLEHLNLFGCTSLEYFPEIEGEMKNVTRLHLLCTGIKDLPFSFRNLSGLWNLCLSGHEMCKLPSVIGMMPQLLYCYIEGRGNKGRISRKVEEGFQGILTHSLPSQNLGSLHLINSNLSDEFFQLALAWFPNVKWLDLRGNNFTVLPECIQQFHFLEKLIVDDCLYLREIRGLPLNLKKFSAVNCKSLSPRAKSLLANQGLHEGRSTSFLMPVGTIPRWFEQRRSGGTCISFWFRGTKFPAKSLCVAILLKDHIPSLREVKTFLCINGKVTSLDNTGVEQLLIFNMNSLLSCCPPLGEHGWNHAEVVVVEGRDNDDKKVPSELIVKEIGMHVVKQNDTSIIQDIRFTDPYKMTQVIMMMMMLSKVLPNHKRQPLLLETCIGLWTLLFLTHTLSGTHTE 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181290g00020 537 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 57 18 327 - -
Stsc181290g00020 537 Gene3D Ribonuclease Inhibitor 1 156 IPR032675 -
Stsc181290g00020 537 Gene3D Ribonuclease Inhibitor 157 337 IPR032675 -
Stsc181290g00020 537 SUPERFAMILY L domain-like 2 328 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181290g00020 Stsc-Chr181290 122157 124608 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181290g00020 14 212 WRKY Transcription Factor Family AT4G12020 35.922 2.81e-21 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181290g00020 - - ahf:112751488 615.535