Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181289g00018 ATGTTGGATTCCAATCCCACCTTAGTGGATGATTGTCGTGGTGTTCTTCACGTGTATAGTGATGGTTCTATAGTACGTTCTTCTAATCCAAGCTTCAATGTTCCTATCCAAGACAACGGCACCGTTTTGTGGAAAGATGTCGTTTTTGATCCTGAGCATGATCTTTGGCTTCGGCTCTACAAGCCAGCTGATTCGGCCAATTCCGGCTCCAAGCTTCCAATTTTTTACTATATCCATGGTGGCGGCTTTTGCATTGGCTCCCGGACATGGCCTAACTGTCAAAACTATTGCCTCCGGCTAGCTTCTGAGCTTCAAGCCGTGGTCGTCGCCCCAGATTATCGGCTGGCTCCAGAGAATCGGCTCCCAGCCGCAATTGAGGATGGCTACATGGCCATCAAGTGGCTTCATGCTCAAGCTGTGAGCAACAAGCCGGATCCTTGGTTGAGTGAAGTGGGTGATTTCAGCCGAGTGTTCATATCCGGCGACTCAGCCGGTGGGAACATAGCTCACCATTTGGCTATTCGGCTCGGCTCCAAGTCGATGGAGTTGGCGCCAGTTCAGGTGAAGGGCTATATTCTATTGGCACCTTTCTTTGGTGGAACTATCCGAACCAAATTAGAAGCTGAAGGACCCAAAGATGCTTTTCTCAATTTGGAACTTATTGACAGGTTTTGGAGGCTTTCAATACCTGTTGGAGAAACCACTGATCACCCACTTGTGAATCCATTTGGGCCAAATAGCAAGAGCCTTGAAGCAATTGATCTTGACCCAATTTTAGTGGTGGTTGGAGGTAGCGATTTGCTTAGAGACAGGGCAGAGGATTATGCAGTGAAGCTTAAGGATTGGGGTAAAGATGTAGAGTATGTAGAATTTGAAGGGCAGCAACATGGTTTTTTCACCATTAATCCCAACTCAGAGCCATCAAAGAAGTTGATGTTGGTCATCAAACAGTTCATGAACAAGTATTCTGCCTAA 975 0.4687 MLDSNPTLVDDCRGVLHVYSDGSIVRSSNPSFNVPIQDNGTVLWKDVVFDPEHDLWLRLYKPADSANSGSKLPIFYYIHGGGFCIGSRTWPNCQNYCLRLASELQAVVVAPDYRLAPENRLPAAIEDGYMAIKWLHAQAVSNKPDPWLSEVGDFSRVFISGDSAGGNIAHHLAIRLGSKSMELAPVQVKGYILLAPFFGGTIRTKLEAEGPKDAFLNLELIDRFWRLSIPVGETTDHPLVNPFGPNSKSLEAIDLDPILVVVGGSDLLRDRAEDYAVKLKDWGKDVEYVEFEGQQHGFFTINPNSEPSKKLMLVIKQFMNKYSA 324
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181289g00018 324 Gene3D alpha/beta hydrolase 16 323 IPR029058 -
Stsc181289g00018 324 PANTHER ARYLACETAMIDE DEACETYLASE 12 305 - -
Stsc181289g00018 324 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 157 169 IPR033140 -
Stsc181289g00018 324 SUPERFAMILY alpha/beta-Hydrolases 5 322 IPR029058 -
Stsc181289g00018 324 Pfam alpha/beta hydrolase fold 76 299 IPR013094 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181289g00018 Stsc-Chr181289 85224 87067 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181289g00018 8 320 Carbohydrate Esterase AT5G16080 33.750 2.50e-54 179
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181289g00018 - - aprc:113858789 552.362