Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181288g00017 ATGGGAGCCAGCTTTCCAGCTTATAGAACCTTTGCTTTGGATGAACTGAAGGAAGCTACAAATAATTTTGATGAATCAAGTTTCATAAGTGAGGGTCCAAATGGCCAGATATACAAGGGAGTGCTCTCAGACGGAATGGCTGTTACTATAAGAGGATTGAAAATGCGAAAGAGACATAGCCCTCAGAATTACATGCACCACATTGAGTTGATTTCGAAACTTCGGCATTCCCACTTGATCAGTGCTCTTGGTCATTCATTTGAATGCAACCAGGATGATTCAAGCGTCAGCACTATATTCCTCGTGTTTGAGTTTGTTCCAAACAAGACTTTAAGGAGCTGTGTCTCTGCAGGATCTGCCAGCGAAAAGCTTTCTTGGACGCAAAGGATATTAGCTGCGATCGGAGTGGTAAAAGGCATTCAGTTCTTGCACACAGGGATAGTGCCTGGATTATATTCCAATAATCTCAAGATAACTGATGTTCTTTTGGATAACAATCTTAATGTTAAAATAAGCAGTTATAATATCCCTCTTTCTGCTGAAACTAGAAGAACGGTCAGCAATGGACCTTACCCTGGATTAAAAGGAAATGTCCAAGAAAGGTAA 606 0.4076 MGASFPAYRTFALDELKEATNNFDESSFISEGPNGQIYKGVLSDGMAVTIRGLKMRKRHSPQNYMHHIELISKLRHSHLISALGHSFECNQDDSSVSTIFLVFEFVPNKTLRSCVSAGSASEKLSWTQRILAAIGVVKGIQFLHTGIVPGLYSNNLKITDVLLDNNLNVKISSYNIPLSAETRRTVSNGPYPGLKGNVQER 201
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181288g00017 201 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 11 177 - -
Stsc181288g00017 201 ProSiteProfiles Protein kinase domain profile. 23 201 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181288g00017 201 Pfam Protein tyrosine and serine/threonine kinase 29 176 IPR001245 GO:0004672|GO:0006468
Stsc181288g00017 201 SUPERFAMILY Protein kinase-like (PK-like) 6 175 IPR011009 -
Stsc181288g00017 201 Gene3D Phosphorylase Kinase; domain 1 4 105 - -
Stsc181288g00017 201 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 1 105 - -
Stsc181288g00017 201 Gene3D Transferase(Phosphotransferase) domain 1 106 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181288g00017 Stsc-Chr181288 142915 144836 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181288g00017 2 181 Miscellaneous Gene Families AT3G03770 64.444 6.71e-78 246
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Stsc181288g00017 PK_Tyr_Ser-Thr 5.7e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181288g00017 - - adu:107462774 381.333