Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181288g00015 ATGGAGACTCGTGCCGCCGCAAAGAGGAGGGCTATGGCTGCAAGCCTCACTGAGAATCAACCCCTCAAAAGGAAGCGTGTTGTCTTAGGTGAACTTCCCAATTTCACTACGGAGAATTTGAGTGCCCAGAAACCCAAACCCAAACCCAAACCCAAATCCAAATCCCTCAACAATGCCAAGCCCAAGAAAGCTTTTGTCTCCGACAAGAATATCAAGCTNNNNNNNNNNAAGGAGGAGAAGGAGAATGTGCTTGTTGATGAAGATGACGAGCTCACTAATGTTGACATTGTTGCCTCTGATATCTATATGTACCTTCGCAAGATGGAGAATAGAAGGCCAAGAATTGATTACCTTGAGAGGATTCAGAAAGATGTAACTGCCAACATGAGAGGGATTTTGGTGGAAATTGCTGAGGAATACAAGCTTCTCTCTAATACTCTCTATCTTTCGATTTCTTACATTGATAGATACCTCTCTATGAACCGTATCACTAAGCCAACCCTTCAGTTGCTGGGTGTTTCAGCGATGCTCATTGCTGCGTAA 543 0.4346 METRAAAKRRAMAASLTENQPLKRKRVVLGELPNFTTENLSAQKPKPKPKPKSKSLNNAKPKKAFVSDKNIKLXXXKEEKENVLVDEDDELTNVDIVASDIYMYLRKMENRRPRIDYLERIQKDVTANMRGILVEIAEEYKLLSNTLYLSISYIDRYLSMNRITKPTLQLLGVSAMLIAA 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181288g00015 180 MobiDBLite consensus disorder prediction 1 61 - -
Stsc181288g00015 180 Gene3D - 114 180 - -
Stsc181288g00015 180 SUPERFAMILY Cyclin-like 91 180 IPR036915 -
Stsc181288g00015 180 PANTHER CYCLINS 64 180 IPR039361 -
Stsc181288g00015 180 Pfam Cyclin, N-terminal domain 100 180 IPR006671 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181288g00015 Stsc-Chr181288 136552 137549 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181288g00015 3 180 Core Cell Cycle Gene Families AT1G47230 44.324 4.63e-37 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181288g00015 K06627 - qsa:O6P43_016015 142.895