Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181288g00014 ATGGAGACTCGTGCCGCCGCAAAGAGGAGGGCTATGGCTGCAAGCCTCACTGAGAATCAACCCCTCAAAAGGAAGCGTGTTGTCTTAGGTGAACTTCCCAATTTCACTACGGAGAATTTGAGTGCCCAGAAACCCAAACCCAAACCCAAACCCAAATCCAAATCCCTCAACAATGCCAAGCCCAAGAAAGCTTTTGTCTCCGACAAGAATATCAAGCTNNNNNNNNNNAAGGAGGAGAAGGAGAATGTGCTTGTTGATGAAGATGACGAGCTCACTAATGTTGACATTGTTGCCTCTGATATCTATATGTACCTTCGCAAGATGGAGAATAGAAGGCCAAGAATTGATTACCTTGAGAGGATTCAGAAAGATGTAACTGCCAACATGAGAGGGATTTTGGTGGAAATTGCTGAGGAATACAAGCTTCTCTCTAATACTCTCTATCTTTCGATTTCTTACATTGATAGATACCTCTCTATGAACCGTATCACTAAGCCAACCCTTCAGTTGCTGGGTGTTTCAGCGATGCTCATTGCTGCAAATTAA 546 0.4304 METRAAAKRRAMAASLTENQPLKRKRVVLGELPNFTTENLSAQKPKPKPKPKSKSLNNAKPKKAFVSDKNIKLXXXKEEKENVLVDEDDELTNVDIVASDIYMYLRKMENRRPRIDYLERIQKDVTANMRGILVEIAEEYKLLSNTLYLSISYIDRYLSMNRITKPTLQLLGVSAMLIAAN 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181288g00014 181 MobiDBLite consensus disorder prediction 1 61 - -
Stsc181288g00014 181 SUPERFAMILY Cyclin-like 91 180 IPR036915 -
Stsc181288g00014 181 PANTHER CYCLINS 64 180 IPR039361 -
Stsc181288g00014 181 Pfam Cyclin, N-terminal domain 100 180 IPR006671 -
Stsc181288g00014 181 Gene3D - 100 112 - -
Stsc181288g00014 181 Gene3D - 113 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181288g00014 Stsc-Chr181288 136552 137549 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181288g00014 3 180 Core Cell Cycle Gene Families AT1G47230 44.324 4.64e-37 129
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181288g00014 K06627 - qsa:O6P43_016015 142.895