Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181288g00006 ATGGCAGAGGTCATCAACATGCCCTCCGATTCCGTCGACAAATCCCCTTCCTCTTCTGCTCCACCACCTCCCCCTCCACCTCCTGCTCCTCCCTCTTCCTCCGCTCCCGCCTCTGCCTCCGTTTCCGCCGCCGCCAATGACGATCTACCACCTCCGCCTCCCCCACCACCGCATTCCTCCTCCCGCAGGAGAGACCGGGACAGGGACAGGAGGGACGATAGGGATTTCGATCGCCACTCTCACCGTCGTGGTGGCGGTGGCGGTGGCGGCGATTACTACGACCGAAACATGTCTCCGCCTCCGCCCCCTCCCAGGGACAGGGATAGAGACAGGGACTTCAAGCGCCGTCGCAGCCCCAGCCCTCCCCACCGCGACCGCCGCTATTCTCCTGCCTCACGTCGCTCCCCTCCGCCGTATAAGCGATCCAGGAGGGGTAGTCCTCGCGGTGGTTATGGTCCCGATGACAGGTTTGGGTATGATTATTATGGTGGCTATGATAGGGGAGTGGGTGGAAGATCTGGTTATGCAGATGATAAGTCTTATGGAAGGTTTGGGCATCGTCCTGCTGGGGGATATCAAAATGGGATTTCTGATATGGAATCCAATCGTGGTTATGCAGACATGCCAAGTGGTGGTGCACAAAGAGAAGGATTGATGTCCTATAAGCAATTCATTCAGGAGCTTGAGGATGATATACTGCCAGCTGAAGCAGAACGTAGATATCAAGAGTACAGATCAGAATACATTTCTACCCAAAAGCGAGCTTACTTTAATGCACATAAGGATGAGGACTGGTTGAAAGATAAATATCATCCTACAAATTTACTCTCAGTCATTGAAAGGAGGAACGAAGACGCTCGACAGCTGGCGAAGAATTTTTTGCTGGATTTGCAGAGTGGAACATTAGATCTAAATCCTGGTTTAAATGCCTCTTCATCCACCAAATCAGGACCAACTAGTGAACCAAATTCCGAGGAGGAAACAGATACTGGAGGTAAAAGAAGAAGACACGGTAGGGGATCTGATAAAGACAATGATTTCTCAGCTGCTCCAAAGGCTCACCCTGCTAGTTCTGAACCTAGACGGATACAAATTGATGTTCAACAAGCTCAGGCACTTGTTCGTAAGCTTGACACCGAAAAAGGAATTGAAGATAATATTTTATCCAGCAGTAATCACAATAAAAATGATGACAAAGCTCACAGTGGCTCTGTGGGTCCCATAATAATTATCCGAGGCCTGACATCTGTTAAAGGTTTAGAGGGTGTTGAGCTTTTGGACACACTTATTACATATCTTTGGCGGATTCATGGTGTAGACTATTACGGTATGATTGAGACTAATGAGCCCAAGGGTTTTAGGCATGTGAGGGCAGAAGGAAATGGGCATGAAGAAATAGGAAGGTCAGGATCTGAATGGGAGAAGAAACTTGACTCATTTTGGCAGGGAAGGCTCAATGGTCAGGATCCCTTGGAAGTTATGACTGCTAAGGAGAAGATAGATGCTGCAGCAGTTGAGGTGTTGGATCCCTATGTGCGGAAAATTAGGGATGAAAAGTATGGATGGAAATATGGTTGTGGAGCCAAGAGCTGCACAAAGCTTTTTCATGCAGCAGAATTTGTGCACAAACATCTGAAGCTAAAACACCCAGAACTTGTTATGGAACAAACTTCAAAAGTGCGCGAGGATCTCTATTTTCAAAATTACATGAATGATCCAGATGCTCCAGGTGGAACACCTATCATGCAGCAACCTCAGAAGGATAGGCCTTTAAAGCGAAGATTAGGACTGGAAGGTCGGTTGAGAGATGATCGTGGTAATCGTCGAGATCATGATCGGAATGACAGGATAAATGATGGAGATAGGCCAGAGGGTTCCCCTAACCGTGACAGGCAATCTAAAGCACTCGAGATGGGGAATCATGATGAAACCATGTATGATACATTTGCAGGTCCTGGGGTACCTCCATTTGCTTCTGATATGCCTCCTCCACCCGTGTTGATGCCTGTACCTGGTGCTGGGCCGTTGGGACCCTTTGTTCCTGCTCCACCAGAAGTTGCAATGCAGATGTTAAGAGAACAAGGAGGNNNNNNNNNNGGGTAG 2103 0.4831 MAEVINMPSDSVDKSPSSSAPPPPPPPPAPPSSSAPASASVSAAANDDLPPPPPPPPHSSSRRRDRDRDRRDDRDFDRHSHRRGGGGGGGDYYDRNMSPPPPPPRDRDRDRDFKRRRSPSPPHRDRRYSPASRRSPPPYKRSRRGSPRGGYGPDDRFGYDYYGGYDRGVGGRSGYADDKSYGRFGHRPAGGYQNGISDMESNRGYADMPSGGAQREGLMSYKQFIQELEDDILPAEAERRYQEYRSEYISTQKRAYFNAHKDEDWLKDKYHPTNLLSVIERRNEDARQLAKNFLLDLQSGTLDLNPGLNASSSTKSGPTSEPNSEEETDTGGKRRRHGRGSDKDNDFSAAPKAHPASSEPRRIQIDVQQAQALVRKLDTEKGIEDNILSSSNHNKNDDKAHSGSVGPIIIIRGLTSVKGLEGVELLDTLITYLWRIHGVDYYGMIETNEPKGFRHVRAEGNGHEEIGRSGSEWEKKLDSFWQGRLNGQDPLEVMTAKEKIDAAAVEVLDPYVRKIRDEKYGWKYGCGAKSCTKLFHAAEFVHKHLKLKHPELVMEQTSKVREDLYFQNYMNDPDAPGGTPIMQQPQKDRPLKRRLGLEGRLRDDRGNRRDHDRNDRINDGDRPEGSPNRDRQSKALEMGNHDETMYDTFAGPGVPPFASDMPPPPVLMPVPGAGPLGPFVPAPPEVAMQMLREQGGXXXG 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181288g00006 700 MobiDBLite consensus disorder prediction 1 212 - -
Stsc181288g00006 700 MobiDBLite consensus disorder prediction 326 349 - -
Stsc181288g00006 700 ProSitePatterns Zinc finger C2H2 type domain signature. 526 549 IPR013087 -
Stsc181288g00006 700 MobiDBLite consensus disorder prediction 301 367 - -
Stsc181288g00006 700 MobiDBLite consensus disorder prediction 301 325 - -
Stsc181288g00006 700 MobiDBLite consensus disorder prediction 59 85 - -
Stsc181288g00006 700 Pfam SERRATE/Ars2, N-terminal domain 222 303 IPR021933 -
Stsc181288g00006 700 MobiDBLite consensus disorder prediction 385 404 - -
Stsc181288g00006 700 PANTHER ARSENITE-RESISTANCE PROTEIN 2 61 696 IPR039727 GO:0006397
Stsc181288g00006 700 MobiDBLite consensus disorder prediction 564 660 - -
Stsc181288g00006 700 MobiDBLite consensus disorder prediction 587 641 - -
Stsc181288g00006 700 MobiDBLite consensus disorder prediction 101 131 - -
Stsc181288g00006 700 MobiDBLite consensus disorder prediction 17 34 - -
Stsc181288g00006 700 Pfam Arsenite-resistance protein 2 468 654 IPR007042 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181288g00006 Stsc-Chr181288 50146 57958 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181288g00006 1 696 C2H2 Transcription Factor Family AT2G27100 58.550 0.0 685
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181288g00006 K27103 - gmx:100811300 887.871