Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181286g00025 ATGGCTCTGAAAATAGATGAAAACATTCACAACCCTCTGTCCTTTCTTAGACCAATGATCACTATCTCCTTGTTATACTTGATCTCTCTAACAAAACTTTCAATCTGCCAAGAAGATAAAAGATATGAAGTGTGCGCTAAGGCTTACAGCTGCGGCGATATAGCCAACATCTACTATCCTTTCTGGGGAGGTGGCAGGCCAAGCTATTGCGGCCTCAGCCAGCAATTCAAGCTCAGTTGTGATGCTAATCACAACACCTCCATTCAACTTGACTCCCAGACTTTTCATGTGCTGAATATCGATCAAGCTCTTTGCAACATAACACTAGTTAGAACTGGGATTGCCTATGATCACTGCTCTTCTCATTTAACCAACACTTCCTTAGACACAAGCCGCTTTCGCTTCTTGCCAAATGTTAGGAACATCACAATCTTCTATGACTGCTCTGCCAACAACAATGAAACAATACACTCTTTCCATTGCAAGGATGATCCCAAAAAACAAGCTTTCTATGGGGATTCGGCAGTTGTGGAGGCTCAGAACTGCCAAGGAGTTCAGGTGGAAGTGCAGGCAACACAAGAAGTGAGAGCTAATGAGTATGGAATTGATGGGTTGAATAAAGCCTTGAGTGCAGGGTTTGATGTGAATTATACTTCAGCTTTGGACACTCAAAGATGCTTAGGATGCCTCTCGACTAAAGGAATATGCGGATCCAAAGATGAGTTTCAGTTTACCTGCTATTGCCCTGATGGAACTGATCATGCTTTTGATTGTTCCTATCATCATAGTGTTGCTGCTGCTGTGCTTAGTGCAGTTACATTAGGCATTGCCTTTAATATCTATTATCGTAGAAGAAAGAAGAATTTTCAAGCTATATCATTTGTACAATCTCGCAGCATTTCTTCTTATCTAAAAGACACTGAGAAGGGACGTGAAAAATACTCTGGACTCCAATTCTTCTCCTATAGAGAACTTCAAGAGGCCACAAACAACTTTAATTCAACCAGGGAACTAGGAGATGGAGGCTTTGGGAAAGTGTATTTTGGAAAACTTGGAGACGGCCGATTTGTTGCGGTGAAAAAGATGTATGAAAACAATTACAGGACAGTAGAACAATTTATCAACGAAATTGAGATCTTAACCAGCTTGCGCCACCAAAATCTTGTGTCACTATATGGATGTAATTCCCGGCACAGCAACGAACTAATGCTTGTATATGAGTATGTTCCTAATGGAACAGTAGCAGATCATCTCCATGGGGAGAAAGCAAAATCAGGAGCTCTCTCTTGGGATATCAGAATGAACATTGCTATTGAGACTGCTAGTGCATTGGTATATCTTCATGCTTCAGACATCATTCATAGAGATGTTAAAACCAATAATATACTCCTTGATGACCACTTTAGAGTGAAAGTAGCTGATTTTGGACTCTCAAGACTATTTCCAAATCATGTAACTCATGTTTCGACAGCGCCACAAGGCACACCTGGCTATGTTGATCCAGAGTACCATGAATGCTACCAGCTGACTGATAGAAGTGATGTTTACAGCTTTGGAGTTGTGCTGATTGAGCTAATATCTTCAATGCATGCAGTTGACCTAACAAGGCACAGGCATGAGATCAATTTGTCCAACATGGCCATTAAGAAAATTCAGAGCGGTGCATTGCATGAGATTGTAGACAAAAGCCTTGGATTCGAATCGGATTTGAGGGTAAGGAAGATGATCAATGCTGTTGCAGAGTTGGCATTTCAATGCTTGCAGAGTTCTAAGGATATGAGACCTTCAATGCTGCAAGTGCTGGATACTCTGAAGGATATACAAAGTGATGGGAAATATAAAAGCAAACCAGAGGTGATTGATATATCAACAGAAGAAGAAGATAATGGTGCAGCTTTGCTCAATAACAAACCACCTCCACCTTCCCCTGATTTAGGTTTGTTGAAAAAATAA 1953 0.4091 MALKIDENIHNPLSFLRPMITISLLYLISLTKLSICQEDKRYEVCAKAYSCGDIANIYYPFWGGGRPSYCGLSQQFKLSCDANHNTSIQLDSQTFHVLNIDQALCNITLVRTGIAYDHCSSHLTNTSLDTSRFRFLPNVRNITIFYDCSANNNETIHSFHCKDDPKKQAFYGDSAVVEAQNCQGVQVEVQATQEVRANEYGIDGLNKALSAGFDVNYTSALDTQRCLGCLSTKGICGSKDEFQFTCYCPDGTDHAFDCSYHHSVAAAVLSAVTLGIAFNIYYRRRKKNFQAISFVQSRSISSYLKDTEKGREKYSGLQFFSYRELQEATNNFNSTRELGDGGFGKVYFGKLGDGRFVAVKKMYENNYRTVEQFINEIEILTSLRHQNLVSLYGCNSRHSNELMLVYEYVPNGTVADHLHGEKAKSGALSWDIRMNIAIETASALVYLHASDIIHRDVKTNNILLDDHFRVKVADFGLSRLFPNHVTHVSTAPQGTPGYVDPEYHECYQLTDRSDVYSFGVVLIELISSMHAVDLTRHRHEINLSNMAIKKIQSGALHEIVDKSLGFESDLRVRKMINAVAELAFQCLQSSKDMRPSMLQVLDTLKDIQSDGKYKSKPEVIDISTEEEDNGAALLNNKPPPPSPDLGLLKK 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181286g00025 650 FunFam receptor-like protein kinase FERONIA 296 408 - -
Stsc181286g00025 650 FunFam Wall-associated receptor kinase-like 20 409 617 - -
Stsc181286g00025 650 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 22 644 IPR044652 GO:0004672
Stsc181286g00025 650 MobiDBLite consensus disorder prediction 636 650 - -
Stsc181286g00025 650 MobiDBLite consensus disorder prediction 625 650 - -
Stsc181286g00025 650 Gene3D Phosphorylase Kinase; domain 1 303 408 - -
Stsc181286g00025 650 ProSiteProfiles Protein kinase domain profile. 332 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181286g00025 650 SUPERFAMILY Protein kinase-like (PK-like) 314 604 IPR011009 -
Stsc181286g00025 650 Pfam Wall-associated receptor kinase galacturonan-binding 45 110 IPR025287 GO:0030247
Stsc181286g00025 650 ProSitePatterns Protein kinases ATP-binding region signature. 338 361 IPR017441 GO:0005524
Stsc181286g00025 650 ProSitePatterns Serine/Threonine protein kinases active-site signature. 452 464 IPR008271 GO:0004672|GO:0006468
Stsc181286g00025 650 Pfam Wall-associated receptor kinase C-terminal 176 251 IPR032872 -
Stsc181286g00025 650 SMART serkin_6 332 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181286g00025 650 Gene3D Transferase(Phosphotransferase) domain 1 409 620 - -
Stsc181286g00025 650 Pfam Protein kinase domain 333 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181286g00025 Stsc-Chr181286 165135 168024 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181286g00025 47 643 Receptor kinase-like Gene Family AT1G25390 45.098 3.41e-151 449
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Stsc181286g00025 Pkinase 3.7e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181286g00025 - - ahf:112792504 1070.46