Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181286g00010 ATGTCCAAGGTTTGGTCATCTCTGAAGAAATCACTTAACTGCAAGCCTCACTCAACAGAAGTTCATGATCCCATGACAAGTAGAAGAAGACATCAGCACCATAGAAAGAAAACGAAGCAAGGCAAAGTCATACAAGGTTCAAAAAATAATAATAATAATTCAGAGAAACAACGAGACCCTGTTACACATGATATTGTCCTTGATGCCAAGGGCGGAAAAATTAAGATTTGTCTATGTCATCCTCATACTCAAGAAGAAGATGGTGGTAACAAAGGGTTAGAAGGATCATCAAATACATCAACAAGAAGAGCAACATGTCATCGTCATCAATGTTGTGATACACAAGAAAAATGTGTTGATGAAGATCACAGCATCAATGAGAATTCAGTTGTGCAACTTGACAAAGAAGAATCATCTTGGAAGATCATAGAAAGAATTTGCCAAACCAAGAATACGAACCTTGGAACTCAGATAGAATGTGTCTTGAAAGTCCACACCAATGCAAAAACACTCGCTTCCTTTGAAGAATACAGAGAAAATGTGAGAAACATAGTTGAGAACATGCAACCTCGTTGCATAGCCGATGGGAATGAAGTCATGAGGTTTCATGGAACAACCACTGCATGCTCCCTTGGTGTAGTAAATTACCCTTCTGCCCTCTGCACTTTAGAACATTGTGGTTTGTGCCAAATCCTAAAGCATGGTTTCAAGGCAAACCAAGAATTATTCCATGGTGAACATGGTGTTCTCACCACTGCTACAAGTGATCAAGCCCTTGATTCCATTATTTTAACTGAATCATCTGAATATGAATTACCGTTGTTGAGGAAGTGCGTTATAGTGTGCAGAGTAATTGCTGGAAGAGTTCATAACCCTTTGCAAGAGATTCAGGAAGAGACTGATTCGGGTTTTGATTCATTGGTCAAGAAAATAAGTTGTGACTCAGATATTGAACAACTACTTATTTTGAAACCTGGAGCTATTTTACCTTGCTTTGTGGCAGCAACTTCAAGCAGGACAACTCTTAGAGCTACTTTTGCACTATGCCTCGATTCACACCCAAATCTAAGGCCTTTCATCACCTTTCTTGGTGTTGATCTTGCTTGCTTGCTCGCTCGTGGCCCTCATTGGTTTTGCAAGAGAAAAATTGGAGCAAGTTGGAGTAAACACAATTTGGACAGCAATGGAATCTGGCCAAGAATGATTTCACAAGGTGCAGCGGTCTCTACATCAATGTGA 1239 0.3987 MSKVWSSLKKSLNCKPHSTEVHDPMTSRRRHQHHRKKTKQGKVIQGSKNNNNNSEKQRDPVTHDIVLDAKGGKIKICLCHPHTQEEDGGNKGLEGSSNTSTRRATCHRHQCCDTQEKCVDEDHSINENSVVQLDKEESSWKIIERICQTKNTNLGTQIECVLKVHTNAKTLASFEEYRENVRNIVENMQPRCIADGNEVMRFHGTTTACSLGVVNYPSALCTLEHCGLCQILKHGFKANQELFHGEHGVLTTATSDQALDSIILTESSEYELPLLRKCVIVCRVIAGRVHNPLQEIQEETDSGFDSLVKKISCDSDIEQLLILKPGAILPCFVAATSSRTTLRATFALCLDSHPNLRPFITFLGVDLACLLARGPHWFCKRKIGASWSKHNLDSNGIWPRMISQGAAVSTSM 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181286g00010 412 MobiDBLite consensus disorder prediction 1 61 - -
Stsc181286g00010 412 Gene3D - 120 337 - -
Stsc181286g00010 412 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 4 333 - -
Stsc181286g00010 412 SUPERFAMILY ADP-ribosylation 130 337 - -
Stsc181286g00010 412 MobiDBLite consensus disorder prediction 28 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181286g00010 Stsc-Chr181286 91060 95469 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181286g00010 93 334 C2H2 Transcription Factor Family AT5G54630 43.137 5.02e-55 187
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181286g00010 - - ahf:112735647 435.261