Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181284g00018 ATGGAAGAAACATTTGTTCCCTTCCGAGGGATTAAGAATGACTTGAAAGCAAGACTTTTGTGCTACAAGCAAGACTGGACCAGTGGATTCCAATCTGGTTTCAGGATCCTGGCCCCAACTACATACATATTTTTTGCTTCAGCAATTCCGGTTATATCCTTTGGGGAGCAACTGGAGAGAAATACTGATGGAACTCTCACTGCAGTGCAGAGTCTTGCATCAACGGCCATTTGCGGCATTATCCACTCTGTCTTCGGAGGGCAGCCTCTCCTTATTGTAGGTGTAGCTGAGCCAACAGTTCTGATGTACACATTCATGTACAACTTTGCAAAGGATAGAAAAGATTTGGGACACAAATTGTTCCTGCCTTGGACTGGATGGGTTTGTGTTTGGACTGCCTTGTTGCTTTTCTTGCTGTCCATTCTTGGTGCCTGCTCCATAATCAACAGATTCACACGCGTTGCTGGTGAACTATTTGGTTTGCTAATTGCAATGCTCTTTATGCAGCAAGCTATAAAGGGACTTGTTGAAGAATTTGGTGTACCTAAGAACCAGAAAGAAGGTACTTCTAATCAGATTGCACTCCAATCCTCTTGGCTGTTTGGCAATGGAATGTTTGCATTGGTCTTGTCATTTGGCCTTCTTTTTACTGGACTTCAGAGCCGTAAGGCTAGATCGTGGCGTTATGGGACAGGTTGGCTAAGGGGATTAATAGCTGATTATGGAGTCCCTATAATGGTTCTTGTGTGGACTGCTGTTTCTTATATACCTGTTAATAATGTTCCAAGGGGAATCCCCAGGAGACTTTTCAGTCCAAATCCATGGTCTCCTGGTGCATACTCAAACTGGACCGTTATCAAGGAGATGTTGGATGTGCCGATCTTATATATTATTGGAGCATTTATACCAGCAACTATGATTGCTGTGCTTTACTACTTTGATCACAATGTTTCATCACAGCTTGCACAGCAGGAGGAGTTCAATCTAAGAAAACCCCCATCTTATCACTATGACTTGCTAATATTGGGAATTATGACCATACTTTGTGGGCTCATTGGTATCCCTCCTTCAAACGGTGTGATTCCGCAGTCTCCAATGCATACCAAAAGCTTAGCTACCCTAAAACATCAGCTTTTACGAAACAAGCTTGTATCTACTGCACGAAAAAGCATGCGGAGAAATGTGAATCTGAGTCAATTATATCAAAGTATGAGAGAAGCATATGATGAGATGCAGACTCCTTTGGTTCCTCAAATGCCACCTACATTGGGCCTGAAGGAGCTGAAGGAATCAACCATTCAACTGGCTTCAAGTCAGGGATACATTGATGCTCCTGTTGATGAGGTTGTCTTTGATGTGAATAAGGATGTTGATGACCTTTTGCCATTCGAAGTTAAAGAGCAACGCCTTAGTAATCTGCTGCAGTCGTTGATGGTTGGGGCTTGTGTTGCTGCTATGCCTCTTTTGAAGAAGATACCTTCTTCAGTTCTTTGGGGTTACTTTGCCTTCATGGCAATTGAAAGCTTGCCCGGAAACCAGTTTTGGGAAAGAATATTGTATCTTTTCACCGCGCCAAGCAGAAGATACAAATTGCTGGAGGAATACCATGCTACATTCGTGGAGACGGTGCCGTTCAAAACAATTGCCATGTTTACCATCTTTCAGACAGTTTACTTGCTTCTCTGCTTTGGCATAACCTGGATACCAATCGCCGGGGTCCTATTCCCATTGTTGATCATGCTTCTTGTCCCAGTAAGGCAATATATTCTTCCTAAGTTTTTCAAAGGAGCCCATCTTTCGGAGTTGGATGCTGCATCATTCGAGGAAGCTCCTGCCGTTTCCTTCAATGCTCAGGATCCAAATGCTCAGGCAGCAGTAAATATCAGTGGTGGCGAAATTCTTGATGAAATTATTACAAGGAGTCGTGGAGAGTTCCGCCGGACTCAGAGCCCGAAAACATCAAGTTCAACTCCAACTTCATTTGGAGATATACGACCTGCTAGTAGCCCACACCTAACAAGAAGGCTACCGAGCCCTCGAGTAATTGAATTGAGAGGGGAAAGCAGCTTAGGATCAAAGGGTAAGGAGGTAAAGTTGAAGCAAACACCTAGTCCGCAGCCGTCAAATCTTGGGAAACATAACAGTGGTTCATCTTCAAGCTGA 2163 0.4378 MEETFVPFRGIKNDLKARLLCYKQDWTSGFQSGFRILAPTTYIFFASAIPVISFGEQLERNTDGTLTAVQSLASTAICGIIHSVFGGQPLLIVGVAEPTVLMYTFMYNFAKDRKDLGHKLFLPWTGWVCVWTALLLFLLSILGACSIINRFTRVAGELFGLLIAMLFMQQAIKGLVEEFGVPKNQKEGTSNQIALQSSWLFGNGMFALVLSFGLLFTGLQSRKARSWRYGTGWLRGLIADYGVPIMVLVWTAVSYIPVNNVPRGIPRRLFSPNPWSPGAYSNWTVIKEMLDVPILYIIGAFIPATMIAVLYYFDHNVSSQLAQQEEFNLRKPPSYHYDLLILGIMTILCGLIGIPPSNGVIPQSPMHTKSLATLKHQLLRNKLVSTARKSMRRNVNLSQLYQSMREAYDEMQTPLVPQMPPTLGLKELKESTIQLASSQGYIDAPVDEVVFDVNKDVDDLLPFEVKEQRLSNLLQSLMVGACVAAMPLLKKIPSSVLWGYFAFMAIESLPGNQFWERILYLFTAPSRRYKLLEEYHATFVETVPFKTIAMFTIFQTVYLLLCFGITWIPIAGVLFPLLIMLLVPVRQYILPKFFKGAHLSELDAASFEEAPAVSFNAQDPNAQAAVNISGGEILDEIITRSRGEFRRTQSPKTSSSTPTSFGDIRPASSPHLTRRLPSPRVIELRGESSLGSKGKEVKLKQTPSPQPSNLGKHNSGSSSS 720
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181284g00018 720 Pfam HCO3- transporter family 464 553 IPR011531 GO:0006820|GO:0016020
Stsc181284g00018 720 Pfam HCO3- transporter family 205 376 IPR011531 GO:0006820|GO:0016020
Stsc181284g00018 720 Pfam HCO3- transporter family 7 180 IPR011531 GO:0006820|GO:0016020
Stsc181284g00018 720 Gene3D Helical hairpin bin 18 60 - -
Stsc181284g00018 720 MobiDBLite consensus disorder prediction 699 720 - -
Stsc181284g00018 720 FunFam probable boron transporter 2 18 60 - -
Stsc181284g00018 720 MobiDBLite consensus disorder prediction 648 666 - -
Stsc181284g00018 720 PANTHER ANION EXCHANGE PROTEIN 2 611 IPR003020 GO:0005452|GO:0006820|GO:0016020
Stsc181284g00018 720 MobiDBLite consensus disorder prediction 644 720 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181284g00018 Stsc-Chr181284 175605 179619 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181284g00018 1 696 Antiporters AT3G62270 74.322 0.0 1059
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181284g00018 K24194 - gmx:100793554 1270.37