Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181283g00031 ATGCCATCAGCATTTTGTGCTGAGAAGCTTGTGGAGCTTCACATCCCAGGCAGTCAGGTTACTAGACTCTGGGATGGAGTGCAGGATCTGGTGAATTTAAAAAAAATTGACCTTTCAAAATGCAAACAGTTGGTGGAACTTCCGGATCTTAGTAGGGCAACAAATCTAGAGGAGATAAACATCTCCGATTGTGAAGTTTTGTGTCAACTTCACCCATCTATTTTATCCAGTCCAGCACTTGAATATCTGATGCTCTATGGATGCAAAGAACTGAAGAGTTTCAAAGGGGAGATTCGTTCCAAGTCTCTTAGAAGACTCGATTTTGATGGTTGCTCAAGTCTAGAGGAATTTTCGGTGTCATCGGGGCAACTGACTTCTTTGACTTTCAAATCCTCAGGAATTAGGAGTCTTGGAAATGAGCTATGTTGCCTTACATCTCTAGAAGAACTTGCTCTTAGTGACTGCAGAGAGCTAACAGAACTCCCTCATAATGTGAAAGCTTTATCAAGACTGCAGATATTGACTGTAAGTGGTTCCAGTAGTCTTCGATCTATACCAGAACTTCCATTATCTATAGGTGAAGTACATGTTACTGATTGCACATCACTGGAAACAATATTTAGTTTAAAGGAAGAATCCTTTTTGAGACGGATCTCATTTATGAATTGCATGAGATTGGATGAAGAGTCGCGGAATATTATCATGGAAGATGCCCATCTCACAATATTAAAAAAGATACTGTTGATTTCAGCAGAAAATAGTCATTTGTGGGACTCTCATGAATTTAATAGGCGGTTCAGTTGTGATGTTTGTTATCCAGGGAGCAAGGTGGCAGAGTGGTTCAAATGTCGAACAACAGAAGGAGCTTCCATAACAGTTGAAATAGATGAACCTTACAACCAGTTGTTGGGTTTCTGTGTGTCATGTGCTGTTTCTCAAGAGTTCTCTCCTTATTACAGTGTCTATTGTGAGTACGACTTGGGAGATGGTGAAAAGTATCCACTTGGAACTTATTATCTAAACGAGCTACGTGGAAGATGGAACACTGATCATGTTTGTCTGTGGTTCCATCCATTTTATGATAGCCGAATAAAGAACAACATTGAAAGGTGCGTTGGCAGGGATGATCATGGCAACACTTGGAACAAAACCATTTTATTCATATTCACTGCTGAAGGACTTGAATCTAGAATGGATGATTTCTTTATAAAAGGGTGTGGGGTTTCACCAATATATCTCTCAGATGTCCTCCATCTCATTCCAAACTGGAATTGA 1275 0.3992 MPSAFCAEKLVELHIPGSQVTRLWDGVQDLVNLKKIDLSKCKQLVELPDLSRATNLEEINISDCEVLCQLHPSILSSPALEYLMLYGCKELKSFKGEIRSKSLRRLDFDGCSSLEEFSVSSGQLTSLTFKSSGIRSLGNELCCLTSLEELALSDCRELTELPHNVKALSRLQILTVSGSSSLRSIPELPLSIGEVHVTDCTSLETIFSLKEESFLRRISFMNCMRLDEESRNIIMEDAHLTILKKILLISAENSHLWDSHEFNRRFSCDVCYPGSKVAEWFKCRTTEGASITVEIDEPYNQLLGFCVSCAVSQEFSPYYSVYCEYDLGDGEKYPLGTYYLNELRGRWNTDHVCLWFHPFYDSRIKNNIERCVGRDDHGNTWNKTILFIFTAEGLESRMDDFFIKGCGVSPIYLSDVLHLIPNWN 424
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181283g00031 424 Gene3D Ribonuclease Inhibitor 1 117 IPR032675 -
Stsc181283g00031 424 Gene3D Ribonuclease Inhibitor 120 263 IPR032675 -
Stsc181283g00031 424 SUPERFAMILY L domain-like 6 250 - -
Stsc181283g00031 424 Pfam Leucine Rich Repeat 9 28 IPR011713 -
Stsc181283g00031 424 PANTHER PLANT BROAD-SPECTRUM MILDEW RESISTANCE PROTEIN RPW8 12 128 IPR039203 GO:0050832
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181283g00031 Stsc-Chr181283 168058 170466 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181283g00031 1 187 WRKY Transcription Factor Family AT4G12020 34.872 9.69e-22 96.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181283g00031 - - ahf:112728390 479.559