Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181283g00030 ATGCCTCTCGATACGAAGGGATCACCCCAAGCAAGATTGGAGTATGTCAGGAGAAGGTTGAACCGGAAAAAGGTTCTCATAGTGCTTGATGATGTGGATACACTAGACATGTTAGATTATCTAACCAGAGAACAAATCTTCTTGGCACCAGGTAGTAGGGTCATTGTAACTACCAGAGACCAACAACTACTAATTGCTGCAAGAGTGCATGTAATATACAAGGTCCGGGGATTGAGCTCTAAGAGTTCCCTCGAGCTCTTTTGCCTAAAAGCCTTTAACAAAAGCTATCCTGAAAATGGATATGAAAAGCTTTCAGAAATGGCAGTTGAATATGCAGATGGCATTCCATTAGCCTTGGAAGTATTGGGTTCCTTTTTATGCTCAAGAACTGCAGAAGCTTGTAAAAGTGCACTAACAAAACTCAAGACTCATCCTGATCTGAGAATTTTCAATGTGTTAAAATTGAGTTATGATGGATTAGATGAGCTTGATAGGAATATATTCCTAGACATTGCTTTCTTTTTCAAAGGAAAACACATAAATGATGTCATAAGGTTTCTAGATTCTTGTGATTTCTTTCCAGAGATTGGAATAAGCAATCTTGAACGTAAAGCGCTTGTTACCATTTCCAACAATAAAATAGAAATGCATGACTTGATACAACAAATGGGCTGGGAAGTAGTTCGTCAAGAATCAAACAAAGATCCTCGAAAGCTCACTTGA 723 0.3845 MPLDTKGSPQARLEYVRRRLNRKKVLIVLDDVDTLDMLDYLTREQIFLAPGSRVIVTTRDQQLLIAARVHVIYKVRGLSSKSSLELFCLKAFNKSYPENGYEKLSEMAVEYADGIPLALEVLGSFLCSRTAEACKSALTKLKTHPDLRIFNVLKLSYDGLDELDRNIFLDIAFFFKGKHINDVIRFLDSCDFFPEIGISNLERKALVTISNNKIEMHDLIQQMGWEVVRQESNKDPRKLT 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181283g00030 240 SUPERFAMILY "Winged helix" DNA-binding domain 148 232 IPR036390 -
Stsc181283g00030 240 PRINTS Disease resistance protein signature 112 126 - -
Stsc181283g00030 240 PRINTS Disease resistance protein signature 19 33 - -
Stsc181283g00030 240 Pfam NB-ARC domain 12 145 IPR002182 GO:0043531
Stsc181283g00030 240 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 14 238 IPR044974 GO:0006952
Stsc181283g00030 240 Gene3D - 77 161 IPR042197 -
Stsc181283g00030 240 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 10 171 IPR027417 -
Stsc181283g00030 240 Gene3D - 3 72 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181283g00030 Stsc-Chr181283 166880 167709 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181283g00030 11 238 WRKY Transcription Factor Family AT5G45050 37.118 1.31e-45 160
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181283g00030 - - ahf:112728390 343.969