Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181283g00029 ATGTGTTTGGGAGCAGGTAGTAGGATCATTGTAACAACTAGAGATGAGCAAATACTAATTGCTGCAAGAGTTCGTGACATATACAAGGTCCAGGAATTGAGCTTTGAAAGTTCCCTTGAGCTTTTTTGCTTAAAAGCCTTTCACAAAAGCTATCCTGAAAATGGATATGAAAAGCTTTCAAAAATGGCAATTAAGTATACTAAAGGAATTCCATTAGCCTTAAAAGTGTTGGGATCCTTTTTATGCTCAAGGAGTGCAGTAGCTTGGGAAAGTGCGCTCAGAAAACTCAAGACTCATCCCGATTCGAGCATTTTCAATGTGTTAAAGTTGAGTTATGATGGATTAGATGATTCAGAGAAGAACATATTCCTTGACATTGCATTCTTTTTCAACGGAGAATGCAAGGATAATGTCATAAGGTTTCTAGACTCTTGTGATTTCTTTGCGGACATTGGAATAGACACTCTTGAGCGTAAAGCTCTTATAACTATTTCCAACAACAGAATAGAAATGCATGACTTGATACAACAAATGGGTTGGGAAGTAGTTAGCAAAGAATCAAACAAGGATCCTGGAAAACTCACTCGAATAAATAGAACTGAAGATTTCTACAATTTATTGAAAGATAGCGAAGGGAAAAAATCAGTTGAAGGCATTATGTGTTACTTGTCTCAAAGTGGAGATCTACACTTACATGCAGACACCTTTAAAAATATGCCTCATCTAAGATTTCTTAAGCTTTACAGTTATTGGGATCAACAGTCAAATGTGTATGATCACACAACCCTTGAGCCGTTTTCTGCTAAACTCAGGTATTTGGAGTGGAATAACTATCCTCTGAATTCTCTACCATCAAGGTTTTGTGCAGAGAAGCTAGTTGAAATTAGGATGCCGTACAGTGAAATTTCTAAACTCTGGGATGGAAAGCAGGATCTAGAGAATTTGACAGTGCTTGACCTTTGTGGATGTATGAAGTTGGTAGAGCTTCCAGATTTCAGTAAAGCAACAAAGCTTAAAACCATAGACCTCTGCTATTGTGAAAAACTATGTCAACTTCATCCATCTATTTTATACATCCAAACACTTGAGCAATTGCATCTTAATGGTTGCACAGAATTGAAGAGTGTCAAAGGAAATTTGAAGTCTCTGATAGAACTTTATGCTAACAAATGTTCAAGCCTGGAGGAAATTTCAGTGTCTTCAGAGACAGTGAGGAATTTGTGTTTCTGTTCATCGAGAATTAAGAATCTCCCAAATGAATTCAGCTGCTTTATATCTCTTGAGTATCTCTGTCTTTGTGATTGCACAGAGCTAATTGAGCTTCCACACAACATCAAAACCCTATCAAGTTTAAGGACTCTTGAGGTAAGAGGTTGTTGTGGTCTTCAATATATACCGGAGCTTCCACCATCTATTCAAGTGTTTCGTGCTGATGGCTGCACATCACTGGAAAGAATATTCAGTTTGAAGGCAGTATTTAGTTTGAACAGGAGGAAGATCTCATTTGTAAATTGCATGAGGCTGGAAGAGGAGTCAGTGAATGATATTATGGAAGATGCCCATCTCACAATATTCAGAAATGTTTTGTTGTGCTCAGAAGAACCAGACCTGATGAATTGTAATCATTATCTTGAGACGGATGGTCTTGTTTGTTATCCTAACTATCTTGACGTGAAAGGTAGTGTTTGTTATCCAGGGTACCGAGTTCCAGAGTGGTTCAGTTGTCAGACAGAAGAAGCATCCATAACAGTTGAACTTGATCAACCTTACTACCGGTTGTTGGGTTTCTTCTTCTGTTGTATTGTTTCTCATAAGTTACCTCCTCATTATTTTAAAGAACGGGATGGTGGTGTCAATATCAAGTGTGAATACCGCCACTTGGGGAATGACGTAGAGCACCCATTTGTTTATGAATGGCTATACTTCATTGATGAAAGAAGATGCAAATCTGATCATGTTTTAATTTGGAATGATCCAACATTTAATAGTTACATATTGTGTAAAGCAGGGTTCATTAGAGGCTGTTATGGCAGTGATGATCATGACAGCACTTGCAACGAAACGATGTCATTCAGATTCAGTATTGATAGACCTGAGAAAGGGAAGAGAGTGGAGAAAAGGGAAGATGATGATGAAGATTGTTTTATCAAAGGCTGTGGGGTTTTTCCAGTGTATGCCTCAACTGTACTGAATGTCATTCATGAACTTGAATTGGAGTTCAAGTTGAACCCTCATTATGACACCACCACAGGGATGGATCTCGAAGCATTGAGAAGTGCGATGATCCGGATGATTAGAGCAAAATCAATAAGCATCCCTGGATACGATAGTAGCTGTGACTCAGAAGAAGGAAGTTTCAGTGACTCAGAAGAAGGAAGTTTCAGTGACCAAGAAGAAGAATGGTGA 2406 0.3836 MCLGAGSRIIVTTRDEQILIAARVRDIYKVQELSFESSLELFCLKAFHKSYPENGYEKLSKMAIKYTKGIPLALKVLGSFLCSRSAVAWESALRKLKTHPDSSIFNVLKLSYDGLDDSEKNIFLDIAFFFNGECKDNVIRFLDSCDFFADIGIDTLERKALITISNNRIEMHDLIQQMGWEVVSKESNKDPGKLTRINRTEDFYNLLKDSEGKKSVEGIMCYLSQSGDLHLHADTFKNMPHLRFLKLYSYWDQQSNVYDHTTLEPFSAKLRYLEWNNYPLNSLPSRFCAEKLVEIRMPYSEISKLWDGKQDLENLTVLDLCGCMKLVELPDFSKATKLKTIDLCYCEKLCQLHPSILYIQTLEQLHLNGCTELKSVKGNLKSLIELYANKCSSLEEISVSSETVRNLCFCSSRIKNLPNEFSCFISLEYLCLCDCTELIELPHNIKTLSSLRTLEVRGCCGLQYIPELPPSIQVFRADGCTSLERIFSLKAVFSLNRRKISFVNCMRLEEESVNDIMEDAHLTIFRNVLLCSEEPDLMNCNHYLETDGLVCYPNYLDVKGSVCYPGYRVPEWFSCQTEEASITVELDQPYYRLLGFFFCCIVSHKLPPHYFKERDGGVNIKCEYRHLGNDVEHPFVYEWLYFIDERRCKSDHVLIWNDPTFNSYILCKAGFIRGCYGSDDHDSTCNETMSFRFSIDRPEKGKRVEKREDDDEDCFIKGCGVFPVYASTVLNVIHELELEFKLNPHYDTTTGMDLEALRSAMIRMIRAKSISIPGYDSSCDSEEGSFSDSEEGSFSDQEEEW 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181283g00029 801 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 2 398 IPR044974 GO:0006952
Stsc181283g00029 801 MobiDBLite consensus disorder prediction 775 801 - -
Stsc181283g00029 801 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 126 IPR027417 -
Stsc181283g00029 801 Pfam C-JID domain 565 727 IPR045344 -
Stsc181283g00029 801 Gene3D Ribonuclease Inhibitor 222 377 IPR032675 -
Stsc181283g00029 801 Gene3D Ribonuclease Inhibitor 378 519 IPR032675 -
Stsc181283g00029 801 PRINTS Disease resistance protein signature 67 81 - -
Stsc181283g00029 801 PRINTS Disease resistance protein signature 310 326 - -
Stsc181283g00029 801 Gene3D - 32 116 IPR042197 -
Stsc181283g00029 801 MobiDBLite consensus disorder prediction 783 801 - -
Stsc181283g00029 801 Pfam Leucine Rich Repeat 291 310 IPR011713 -
Stsc181283g00029 801 SUPERFAMILY L domain-like 220 524 - -
Stsc181283g00029 801 Pfam NB-ARC domain 6 102 IPR002182 GO:0043531
Stsc181283g00029 801 SUPERFAMILY "Winged helix" DNA-binding domain 103 187 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181283g00029 Stsc-Chr181283 162953 165599 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181283g00029 3 525 WRKY Transcription Factor Family AT5G45050 33.277 7.99e-75 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181283g00029 - - adu:107475756 923.694