Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181283g00027 ATGGAGCCGAATGAATTTGGAATCCTTGGAATTTGGGGTATGGGAGGTATAGGTAAAACAACCATTGCTCAAGTTATATTCAATAAATATTCCTCTCAATACGAAGGTTGCTGCTTCTTGAAAAATGTGAGAGAACAATCACAAACGCAGCGTGGCCTGAATGATTTGTGTGTGCAACTTGTTTCTCAACTCCTTGGGATGAAAAGTTCCCCCAACGCAATATCTGACAATGATAAGAAAAGGTTGAGTCGAAAAAAGGTTCTGATAGTGCTTGATGATGTGGATACATTAGACAAGTTAGAGCATCTAGCAAGAGAACAAATGTGTTTGGGAGCAGGTAGTAGAGTTATTGTAACAACTAGAGACAAGCAAGTACTACTTGCTGCAGGAGTGCATCACATATACAAGGTCCACGAATTGAGCTTTCAAAGATCCCGTGAGCTTTTTTGCTTAAAAGCCTTTCACAAAAGCTATCCTGAAAATGGATATGAAGAGCTTTCAGACATGGCAGTTAGGTATGCGGAAGGCATTCCATTAGCCTTAAAAGTGTTGGGATCCTTTTTATGCTCAAGGAGTGCAGCAGCTTGGGGAAGTGCACTAAGAAAACTCGAGACCCATCCTGATTCGAGCATTTTCAATGTGTTAAAGTTGAGTTATGATGGATTAGATGATTCAGAGAAGGACATATTCCTTGACATTGCATTCTTTTTCAAAGGAGAACACAAGGATGATGTTATAAGGTTTCTAGACTCTTGTGGTTTCTATGGAGGCATTGGAATAGACAACCTCCAAGGTAAGGCTCTTATAACTATTTCACGGTACAACACAATAGAAATGCATGACCTGATACAGCAAATGGGTTTGGAAATTGTCTTTAAGCAATCAACTAAGGACGTCAGAAAGCGTAGCCGATTGAGGAATCCTGAGGATGTCAGGAATTTATTGGAAAATAGTAAGGGAGAAAACTCAGTTGAAGGCATCATGTGTGACTTGTCTCAAATTGGAGATCTATGCTTAAATGCACACACCTTTAGAAATATGCCTCATCTAAGATTTCTTAAGCTTTATGATCTTTTGGATCGAAAAGTGTCAAATGTGTACGTTCCCAAAACCCTGAAGGTTTTTTCTGCTAAACTCAGGTATTTTGAATGGAATGGTTATCCTCTGAATTCTCTACCATCAAGGTTTTGTGTGGAGAAGCTTGTTGAGTTTAGCATGCCCAACAGTCAAATTTCTAAACTCTGGGAGGGAACTCAGGATCTTCCCAATTTGACAAGGGTGGACCTTTATGGATGTACACAGTTGGTAGAGCTTCCAGATTTCAGTAAAGCAACAAAGCTTCAAGAAATAATGCTTAGCAAGTGTAAAAAGCTAAGTCAACTTCATCCATCTATTTCATCCCACCAAACACTTGAGCAGTTGTGTCTTAATAGTTGCAAAGAATTGAAGAGTGTGAAATGCCATTTGAAGTCTCTTAAAGAACGTGATGCTGGTGGATGTTCAAGCCTGAAGGAATTTTCAGTGTCAACAGAATTGAATGGAATTAAGAGTCTGCAAAATGAATTCTGTTGCTTTATATCTATTGAATTTCTTAGTTTTATTAATTGCAGAGAGCTAATTGAGCTGCCAGACAACATGAAAGCCCTATCAAGGTTAAGGTTTTTTGACGTAAGTGGTTGTCGTGGTCTCCAATCTATACCAGAACTTCCATCATCTCTTCAAATGCTTTATGCTGATGACTGCACATCACTGGAAAGAATATTCAGTTTGAAGGCAGTATTTAGTTTGAATAGGGGACGAATCTCATTTCCAAATTGCGGGAGACTGGAAGAGGAGTCAGTGAATGATATTATGGAAGATGCCCATCTCACAATATTCAGAAATGTTTTCTTGTCACCAAAATACTTTGATATGTGTGGTAGGGTTTATTATCCAGGGAAGAAAGTTCCAGAGTGGTTCAGGTTTAGGACAGAAGAAGAAGCATCCATAACAATTGAACTTGAACAATGTAACTACCAGTTGTTGGGTTTCGTCTTCTGCTGTGTTGTTTCTCAAAACTTACCTCCTCATTATTTTCATGGCTCTGTTGTGAGCATCAAGTGTGAATACCGCCTCTTCGGAGATGGTATAAAGCACACATATGTAAGTCGATGGTTTCTCCGTGTTAGTAAAAGAAGATTGAACTCCGATCACGTTTTAATTTGGACTGATCCATATTGTAGCTCCAAGGTATTGAATAAAATTGAAAGATGCAGCGACAGTGATGGCAGTGATGATCATGGCTGCACTTGCAACCAAAACATCTCATTTAGATTCAATCCTTATATAGCTGCGAAATGGAAGACAGTGAAAGAAAGGGAAGAAGAAGATGACGATTGTTATATCAAAGGGTGTGGGGTAATTCCAGTGTATGCCTCAACTGTAGTGGATGCCATTCAAAAACTTGAATTGGAGTTCAACTTGAACCCTCATCATAACTCCATCCCACCATCAGAGTGGATACATCTCGACTCATTGAAAAGTGACATGATCCGCAGGAGTAGAGGAAAATCAATAATCGATAGTAGCATTCACTCAGAAGAAGAAAGTTGCGGTGACTCAGAAGAAGAAAGTTGCAGAGACTCAGAAGAAGAACGGTGA 2640 0.3932 MEPNEFGILGIWGMGGIGKTTIAQVIFNKYSSQYEGCCFLKNVREQSQTQRGLNDLCVQLVSQLLGMKSSPNAISDNDKKRLSRKKVLIVLDDVDTLDKLEHLAREQMCLGAGSRVIVTTRDKQVLLAAGVHHIYKVHELSFQRSRELFCLKAFHKSYPENGYEELSDMAVRYAEGIPLALKVLGSFLCSRSAAAWGSALRKLETHPDSSIFNVLKLSYDGLDDSEKDIFLDIAFFFKGEHKDDVIRFLDSCGFYGGIGIDNLQGKALITISRYNTIEMHDLIQQMGLEIVFKQSTKDVRKRSRLRNPEDVRNLLENSKGENSVEGIMCDLSQIGDLCLNAHTFRNMPHLRFLKLYDLLDRKVSNVYVPKTLKVFSAKLRYFEWNGYPLNSLPSRFCVEKLVEFSMPNSQISKLWEGTQDLPNLTRVDLYGCTQLVELPDFSKATKLQEIMLSKCKKLSQLHPSISSHQTLEQLCLNSCKELKSVKCHLKSLKERDAGGCSSLKEFSVSTELNGIKSLQNEFCCFISIEFLSFINCRELIELPDNMKALSRLRFFDVSGCRGLQSIPELPSSLQMLYADDCTSLERIFSLKAVFSLNRGRISFPNCGRLEEESVNDIMEDAHLTIFRNVFLSPKYFDMCGRVYYPGKKVPEWFRFRTEEEASITIELEQCNYQLLGFVFCCVVSQNLPPHYFHGSVVSIKCEYRLFGDGIKHTYVSRWFLRVSKRRLNSDHVLIWTDPYCSSKVLNKIERCSDSDGSDDHGCTCNQNISFRFNPYIAAKWKTVKEREEEDDDCYIKGCGVIPVYASTVVDAIQKLELEFNLNPHHNSIPPSEWIHLDSLKSDMIRRSRGKSIIDSSIHSEEESCGDSEEESCRDSEEER 879
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181283g00027 879 Gene3D Ribonuclease Inhibitor 312 491 IPR032675 -
Stsc181283g00027 879 SUPERFAMILY L domain-like 279 589 - -
Stsc181283g00027 879 Gene3D Ribonuclease Inhibitor 492 615 IPR032675 -
Stsc181283g00027 879 Pfam C-JID domain 644 806 IPR045344 -
Stsc181283g00027 879 Pfam Leucine Rich Repeat 400 419 IPR011713 -
Stsc181283g00027 879 MobiDBLite consensus disorder prediction 850 879 - -
Stsc181283g00027 879 Pfam NB-ARC domain 2 209 IPR002182 GO:0043531
Stsc181283g00027 879 PRINTS Disease resistance protein signature 8 23 - -
Stsc181283g00027 879 PRINTS Disease resistance protein signature 81 95 - -
Stsc181283g00027 879 PRINTS Disease resistance protein signature 174 188 - -
Stsc181283g00027 879 PRINTS Disease resistance protein signature 547 563 - -
Stsc181283g00027 879 Gene3D - 1 133 IPR027417 -
Stsc181283g00027 879 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 4 233 IPR027417 -
Stsc181283g00027 879 Gene3D - 140 223 IPR042197 -
Stsc181283g00027 879 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 8 581 IPR044974 GO:0006952
Stsc181283g00027 879 MobiDBLite consensus disorder prediction 863 879 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181283g00027 Stsc-Chr181283 155619 158712 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181283g00027 2 626 WRKY Transcription Factor Family AT5G45050 30.736 2.88e-79 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181283g00027 - - adu:110278282 994.956