Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181283g00023 ATGTTGAATTTCTCCATTCTTTTATCCGACAGAGATGAATCTGAGCTCGTTAGAGAAATTATCAAGGATGTTTCAGAGAAATTATCTCATCTTTTTTCGAATAGATTCGACGGCCTTGTTGGAATTGATGAAAATTTGAAATTTCTTCAACCTCTGCTGGAAATGGACTCTGATGATGAAGTTCAATTTCTTGGAATATGGGGTATGGGAGGCATAGGTAAAACAACAATTGCCAAAGCAATATTTGAAAGATATGCCTCTCGATACGAAGGTTGCTGCTTTCTACAAAATGTAAGAGAAGAATCACAAAAGTCCAGTCTACATTGCTTATATGAGAAACTCATTTCAGAGCTACTTGAGGGAGAACATGTGCTTGTGAAGGGATCGGCCCAAGCAAGATTGGAGTATGTCAAGAGAAGGTTGAGTTGGAAAAAGGTTCTCATAGTGCTTGATGATGTTGATACATCAGACAAGTTAGATTATCTAACAAGAGAACAAATCTGTTTAGGAGCAGGTAGCAAGGTCATCATAACAACTAGAGATGAGCAAATACTAATTGCTGCAAGTGTGAATCACATATACAAGGTTCGGGGATTGAGCTTTGAAAGTTCCCTTGAGCTTTTTTGCTTAAAAGCCTTTCACAAAAGATATCCTGAAAATGGATATGAGGAGCTTTCAAAAATGGCAGTTGATTATGCAGATGGCATTCCATTGGCCTTAAAAGTATTGGGCTCCTTTCTATGCTCAAGAAGTGTCGTAGCTTGGGAAAGTGCCCTAAGAAAACTCAAGATTCATCCCGATCCGAGCATTTTCAATGTGTTAAAATTGAGTTATGATGGATTAGATGATTTAGAGAAGAGCATATTCTTGGACATTGCATTCTTTTTCAAGGGAGAAAACAAGTATAATGTTATAAGGTTTCTAGACTCGTGTGATCTCTTTGCAGACATTGGAATAAACACTCTTGAAGGTAAAGCTCTTATAACTATTTCCCACAATAGAATAGAAATGCATGACTTGGTACAACAAATGGGCATGGAAATAGTTCGCCAAGAATCACATAAAGACCCCCAAAAGCTCACTCGAATAAATAGACTTGAAGATTTCCACAATTTGTTGAAAAATAGCGAGGAAAAAAGTTTAGTTGAAGGTATTAAGATAAACTTGTCTGAAGCTAAAAATCTACACTTGAATGCCAACACCTTCAGAAATATGCCTCGCCTAAGATTTCTCAAACTTTATTATAGCACTTCAGGTGATGAAAGATCATCAAATGTGACTGTTCCTACAACTCTTGAGAAATTTTGTGATGAACTAAGATATTTGGAATGGTCTGGATATCCTTTGAGTTATCTGCCGTCACCATTTTGTGCTGAGAAGCTTGTTGAGCTTCACATGCCAAACTCTCAGGTTACTAAACTCTGGGATGGAGTGCAGGATCTTGTGAATTTAAAGAAAATTGACCTTTCGAAATGCAAACAGTTGGTGGAACTTCCGGATCTTAGTAGCGCAACAAATCTGGAGCGGATAGACATCTCTGATTGTGAAGTTTTGTGTCAACTTCACCCATCTATTATATCCATCCCAGCACTTAAAATTCTTATACTTAATGGCTGCAAAGAACTGAAGAGTTTTAAAGGGAAGATTCGTTCCAAGTCTCTTGAAGTACTATATTTTGGAGGTTGCTCAAGCCTAGAGGAATTTTCGGTGTCGTCAGGGCAACTGAGTTCTTTGGATCTCAGTTCCACAAGAATTAGGATTCTTGGAAATGAGCTATGCTCCCTTACATGTCTGGAAAAGCTTTTTCTTGTTAATTGCAGAGAGTTAACTGAACTCCCTCATAATATGAAAGCCTTATCAAGATTGCAGACATTGAAGATAAGTTATTGCAGCAGTCTCTGA 1902 0.377 MLNFSILLSDRDESELVREIIKDVSEKLSHLFSNRFDGLVGIDENLKFLQPLLEMDSDDEVQFLGIWGMGGIGKTTIAKAIFERYASRYEGCCFLQNVREESQKSSLHCLYEKLISELLEGEHVLVKGSAQARLEYVKRRLSWKKVLIVLDDVDTSDKLDYLTREQICLGAGSKVIITTRDEQILIAASVNHIYKVRGLSFESSLELFCLKAFHKRYPENGYEELSKMAVDYADGIPLALKVLGSFLCSRSVVAWESALRKLKIHPDPSIFNVLKLSYDGLDDLEKSIFLDIAFFFKGENKYNVIRFLDSCDLFADIGINTLEGKALITISHNRIEMHDLVQQMGMEIVRQESHKDPQKLTRINRLEDFHNLLKNSEEKSLVEGIKINLSEAKNLHLNANTFRNMPRLRFLKLYYSTSGDERSSNVTVPTTLEKFCDELRYLEWSGYPLSYLPSPFCAEKLVELHMPNSQVTKLWDGVQDLVNLKKIDLSKCKQLVELPDLSSATNLERIDISDCEVLCQLHPSIISIPALKILILNGCKELKSFKGKIRSKSLEVLYFGGCSSLEEFSVSSGQLSSLDLSSTRIRILGNELCSLTCLEKLFLVNCRELTELPHNMKALSRLQTLKISYCSSL 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181283g00023 633 Pfam NB-ARC domain 57 264 IPR002182 GO:0043531
Stsc181283g00023 633 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 15 616 IPR044974 GO:0006952
Stsc181283g00023 633 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 28 292 IPR027417 -
Stsc181283g00023 633 Gene3D Ribonuclease Inhibitor 552 633 IPR032675 -
Stsc181283g00023 633 Gene3D Ribonuclease Inhibitor 338 551 IPR032675 -
Stsc181283g00023 633 Pfam Leucine Rich Repeat 460 479 IPR011713 -
Stsc181283g00023 633 Gene3D - 199 282 IPR042197 -
Stsc181283g00023 633 Gene3D - 14 193 IPR027417 -
Stsc181283g00023 633 SUPERFAMILY L domain-like 337 630 - -
Stsc181283g00023 633 PRINTS Disease resistance protein signature 63 78 - -
Stsc181283g00023 633 PRINTS Disease resistance protein signature 479 495 - -
Stsc181283g00023 633 PRINTS Disease resistance protein signature 233 247 - -
Stsc181283g00023 633 PRINTS Disease resistance protein signature 140 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181283g00023 Stsc-Chr181283 133545 135630 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181283g00023 8 633 WRKY Transcription Factor Family AT4G12020 35.906 3.38e-96 322
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181283g00023 - - ahf:112728390 870.922