Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181283g00013 ATGGCTTCTTCTTCTTCTTCTTCTTCCTCTTTATTGAATGCTCCCTGCAGAATTAAATATGATGTGTTCATCAGCTTCAGAGGAGATGACATCCGCACTTCTTTTCTTAGCCATTTGCGAAAAGAGCTTCACCGTAACTCTATCGATTTCTTCATAGACGATGAAAAGATTCACCCTGGAGATGAGATTTCATCCACACTTGTTCAGGTCATTGAAGAGTCTCTGATTTCATTGGTCATCTTTTCGGAAAACTATGCTTCTTCAGCTTGGTGCTTGAATGAACTTGCGAAAGTAATTCAATGCATGAAACAAGATAAAAGGATTGTTATACCTGTTTTCTACAGCGTTCTTCCTTCTGATGTGCGATATCAGAGTAATTCTTTTAAGGAGGCTTTTGATAAACACCAACGCAGATTCAAGGGAGACGCTGCGAAGGTGCAAAGTTGGAGATCTGCTTTAAAAGAAGCTTCTAATTTATCTGGATTTCGTTATCCATCATCCAAATATCTAGATGAATCTGAATTCATTGAAGAAATTGTGAAAGATATTTCAGAGAAATTGTCTTCTATTTTCTCAAGAGAATCCAATGGTCTTGTTGGAATTGATGATAGTTTGAGAGCTATTGAATCATTGTTGGAAATTGAATCAAGTGATGTCCGAATCATAGGGATTTGGGGAATGGGAGGAATAGGTAAAACTACCATTGCCGAATTCTTATTTGACAAATATTCTTCCCAATATGAAGGCAGTTGTATGTTGAAAAATGTAAGAGAAGAATCACAAAAGTCTGGTGTGCCTCATTTATTTGAAAAACTTGTTTCTGAGTTATTGGAGGGAGAAAGTCTTCATTTGAAAGGATCATCCAAAGCAAGATCCAGTTTTCTCCAGAGAAAGTTAAGTCGAAAAAAAGTTTTCGTAGTGCTTGATGATATGGCTACAGTGGAGCAGTTTGAACACCTTGCTACACAATGGTTGGGACCAGGTAGTAGGATCATTGTAACTACCAGAAACAAGGATGTCCTTAGAAAGGTTCATGGGATATACGAGGTCAAGGGCTTGAGCTTTAAAAATTCCCTTAAGCTTTTTTGCTTGAATGCTTTTGACGAAGTCTATCCTAAAACTGGATATGAAGAGGTTTCAAAAATGGCAGTGAATTATGCAAATGGCATTCCATTGGCTTTAAAAGTTTTGGGTTCTCTTTTGTACTCTAAAGGCATAGAAGAATGGGGAAGTGCCTTGGCAAAAGTCAAGATTTATCCTAACGAAGACATTTTTCATGTCTTAAAGTTGAGTTATGATGGGCTAGATGAGTTAGAGAAGGAAATATTCCTTGACATTGTGTTTTTTTTCAAAGGAAAAGAAAAGGATGCTGTCATACCGTTTCTAGAATCATGTGGTTTCTTTCCTGCTATTGGCATAGGCAACCTTTTACTTCGTAAAGAATCAATTGAAGACCCAGGAAGGCGTAGCCGCTTAAGTAACTCTGAGGATGTCTACAATGTATTGAATAATGATAAGGGAACAGACTCAGTTGAAGGCATTATGTTGGACTTGTCTCAAATGAAGAGAGATCTATATTTAGATGGGGACACATTCAAAAGGATGCCTTATATAAGGTTTCTCAAATTTTACAATTTCTGGAGGCCCAAAAAATCAGGGAATGTGTACATAACTTCAGCTCTCAAGTCATTTCCAAACGAACTAAGATACTTGGAGTGGAGTGGCTGCCCTGTGAAGTCTCTTCCACCAACTTTTTGTCCTGAGAAGCTTGTTGAGCTTTCTATGCCACATAGCCCAGTTTCAAAACTTTGGGATGGAGTTCAGGATCTTGTAAATTTAAAGAAGATTAACCTTAGTGCATGCAAGCAGCTAGTGGAGCTTCCAGATTTTACTCGGGCATCAAACCTTAAAGAAATACGTCTCGATGATTGTGTAAGGTTATGTCAACTTCATCCTTCCATTTTATCCATCGACAAGCTTGAAACCTTGAGTCTATATTGTTGCAAAAGCTTGAAAAGCCTTAAAGGAAAGAGTCATTTGAAATCTCTTAAAAAGGTCCATGTTCTTTACTGCTCAAGCTTGAAGGAGTTTTCAGTGTCATCAGAGGAATTAACAAGGTTGGATTTCAATGGGACAATAATTGATACATTGCACTCATCGGTTGGCCGTCTCAGCAAACTTGTACAGTTTGATCTCTGTAATGCGAGAGTTGAAACTCTTCCAAACGAACTGTGCCTCTTGGTATCCCTTGAGGAACTAAATCTTAAAGGTTGCAAACACTTGACTGAACTCCCTCGCAACATGAAAGCCTTATCGCAGTTACAGAATCTCAACTTAACAGATTGCTGTAGCCTTCGATCTTTACCGGAGCTTCCACCGTCTATTATACATTTATGTGCCACCAACTGCACATCGCTGGAGAAATTATTCAATGCAAAGGCAGTATTCAGTTTAAATCTAGTTTCTATTTCATTTGAAAACTGCAAGATGCTTCGTGATGAATCATTCTCAGAATATGTGCATCAACCAATGATGGGAGTAGCAATGAGAGATATATTGGGTGGGATGCTGCAATACATATCTAGTCCTCACTCTCATGGCTACCCTGAATCCAATGGCCACGTATTTTATCCTGGAAGCGAGGTTCCATCATGGTTCAAATATCAGACACAAGGGAATTCCTTAACTATTAACCTTGTGGATGAATCTCGTAACCATCTAGTGGGTTTCGTTTTGTGCTGTGTTGTTCATCATGCTCCGCATCGATCAGAGTATTCTTCTACTCGCCCTGTTCGTTCTTCAGAACGCCATTCCCGAATCAGTTGTCAATTTGGTTCACGATATAGCAAACAAATTGCTAAGATGAGTAGTTGGAGCTCGGATCATGTTTGTATATGGTTTGGAGAAGTTGGTTATCACCATCGATTTCGTGACACGTATGTTACATTCAACTTCGATTGTGGACTTCATAAGGATGATTATTGGGAGTTCGTAGATGGAATGCTACTCTATAAGCCACGACAATGGGAGGTGATAGGTTTCGGGGTTTTCCCAGTATATGCCTCGGACTTGCTCCATGTCTTTCAAAATGTGGATCAGGACTTGCACTTCTTTTTTGATAGATACCACATCAGATGCCCGTACAATATTGATCAAAGAGTTTTCACTCTTGACCAAGTGAAAACAAGGGTGGTTCACAAGATCGAAGAACAACGAAAAGAATTATCATTGAGAACCTTTTGTGGGATTTACGAGGGGGGAAGAAAAAGAGAAAGGGGTATTTGGGAATCTCATCTCTCTTCTGACAGAAAGCTACTGAATATGGAACAACAACAAAAAGAGTTATCACTGTGTGCCTTTTGCGGGATTTGGAAGAAGGAAGAAGAAAAAGAAGGGGAATTTTGGCTCCAAGAGATTTGGCCTAGAGAATGTTGTCCCTTTTCTGACACAGCTGAATTTTTTTGA 3465 0.3905 MASSSSSSSSLLNAPCRIKYDVFISFRGDDIRTSFLSHLRKELHRNSIDFFIDDEKIHPGDEISSTLVQVIEESLISLVIFSENYASSAWCLNELAKVIQCMKQDKRIVIPVFYSVLPSDVRYQSNSFKEAFDKHQRRFKGDAAKVQSWRSALKEASNLSGFRYPSSKYLDESEFIEEIVKDISEKLSSIFSRESNGLVGIDDSLRAIESLLEIESSDVRIIGIWGMGGIGKTTIAEFLFDKYSSQYEGSCMLKNVREESQKSGVPHLFEKLVSELLEGESLHLKGSSKARSSFLQRKLSRKKVFVVLDDMATVEQFEHLATQWLGPGSRIIVTTRNKDVLRKVHGIYEVKGLSFKNSLKLFCLNAFDEVYPKTGYEEVSKMAVNYANGIPLALKVLGSLLYSKGIEEWGSALAKVKIYPNEDIFHVLKLSYDGLDELEKEIFLDIVFFFKGKEKDAVIPFLESCGFFPAIGIGNLLLRKESIEDPGRRSRLSNSEDVYNVLNNDKGTDSVEGIMLDLSQMKRDLYLDGDTFKRMPYIRFLKFYNFWRPKKSGNVYITSALKSFPNELRYLEWSGCPVKSLPPTFCPEKLVELSMPHSPVSKLWDGVQDLVNLKKINLSACKQLVELPDFTRASNLKEIRLDDCVRLCQLHPSILSIDKLETLSLYCCKSLKSLKGKSHLKSLKKVHVLYCSSLKEFSVSSEELTRLDFNGTIIDTLHSSVGRLSKLVQFDLCNARVETLPNELCLLVSLEELNLKGCKHLTELPRNMKALSQLQNLNLTDCCSLRSLPELPPSIIHLCATNCTSLEKLFNAKAVFSLNLVSISFENCKMLRDESFSEYVHQPMMGVAMRDILGGMLQYISSPHSHGYPESNGHVFYPGSEVPSWFKYQTQGNSLTINLVDESRNHLVGFVLCCVVHHAPHRSEYSSTRPVRSSERHSRISCQFGSRYSKQIAKMSSWSSDHVCIWFGEVGYHHRFRDTYVTFNFDCGLHKDDYWEFVDGMLLYKPRQWEVIGFGVFPVYASDLLHVFQNVDQDLHFFFDRYHIRCPYNIDQRVFTLDQVKTRVVHKIEEQRKELSLRTFCGIYEGGRKRERGIWESHLSSDRKLLNMEQQQKELSLCAFCGIWKKEEEKEGEFWLQEIWPRECCPFSDTAEFF 1154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181283g00013 1154 Gene3D - 16 187 IPR035897 -
Stsc181283g00013 1154 SMART till_3 19 159 IPR000157 GO:0007165
Stsc181283g00013 1154 FunFam Disease resistance protein (TIR-NBS-LRR class) 16 189 - -
Stsc181283g00013 1154 Gene3D Ribonuclease Inhibitor 514 676 IPR032675 -
Stsc181283g00013 1154 Gene3D Ribonuclease Inhibitor 677 832 IPR032675 -
Stsc181283g00013 1154 Pfam TIR domain 19 197 IPR000157 GO:0007165
Stsc181283g00013 1154 SUPERFAMILY Toll/Interleukin receptor TIR domain 16 162 IPR035897 -
Stsc181283g00013 1154 Gene3D - 188 349 IPR027417 -
Stsc181283g00013 1154 PRINTS Disease resistance protein signature 608 624 - -
Stsc181283g00013 1154 PRINTS Disease resistance protein signature 221 236 - -
Stsc181283g00013 1154 PRINTS Disease resistance protein signature 298 312 - -
Stsc181283g00013 1154 PRINTS Disease resistance protein signature 387 401 - -
Stsc181283g00013 1154 SUPERFAMILY L domain-like 530 831 - -
Stsc181283g00013 1154 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 700 IPR044974 GO:0006952
Stsc181283g00013 1154 Pfam C-JID domain 877 953 IPR045344 -
Stsc181283g00013 1154 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 190 446 IPR027417 -
Stsc181283g00013 1154 Pfam Leucine Rich Repeat 589 608 IPR011713 -
Stsc181283g00013 1154 Gene3D - 353 436 IPR042197 -
Stsc181283g00013 1154 Pfam NB-ARC domain 206 417 IPR002182 GO:0043531
Stsc181283g00013 1154 ProSiteProfiles TIR domain profile. 18 187 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181283g00013 Stsc-Chr181283 98686 103123 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181283g00013 20 800 WRKY Transcription Factor Family AT4G12020 34.592 1.02e-104 362
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181283g00013 - - ahf:112728432 1466.83