Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181283g00010 ATGGCATATTCTTCTTCCTCTAGATCATCATCATCTTCTTTCAATGTTCCTGAAATCAAACATGATGTCTTCATAAGCTTTAGAGGAGAAGTTCGCACTTCCATTCTTAGCCATTTGATTACAAGATTGAAGGATGAAGGAATTGGTTACTATTTTGACGAGGAAAATCTCCCTGCTGGAGATGAGATTTCACCCACGCTTCTTCAAGCAATTGAGCAATCTTCCATTTCAGTGGTCCTCTTTTCCGAAAACTATGCTTCTTCAAGGTGGTGTATGGAGGAGCTTGTCAAGATTATTGAATGCATGGAACAATACAAAAGGATTGTGATACCTGTTTTTTACAAGGTTGATCCTTCTGATGTAAGGCACCAGAAACGAACTTATGAAGAGGCTTTTCATGTCCACATTAACAAGTACAAGGAAAACTTGGCAAAGGTGCAGAACTGGAGATGTGCACTAAGAAAGACGGCTGATTTGTCTGGAATCCATTATCCATCCAACTTGATCAGAAATGAATCTAAATTCATCGAAGAAATTGTGAAATATATTTATAAGAAACTGCCGCATATTTCCACAAGAGAATCCAATGGTCTTGTTGGAATTGATGATGGTGTTAGAAGTATTGAATCATTATTGAGAGTTGAATCAAGTGAAATTCTTCGAATCATAGGAATTTGGGGGATAGGAGGAATAGGTAAAACTACTCTTGCTGAATTCTTATTTGACAAATATTCTTCCCGATATGAAGGCAGTTGTATGTTGAGAAATGTAAAAGAATCACAAAAGTTTGGTTTGTCTTATTTACGTGACAAACTTATCTCTGAGTTATCAGATGGAGAAAGACTCTCTTTCAAAAAATCATCCAAAGCAAGAAAGTTGAGTTCAAAAAAGGTTTTCATAGTACTTGATGATATGGATACATTAGAGCAGTTTGAACATCTTGCTACAAAATTGCTGGTGGGACCAGGTAGTAGGATCATTATAACATCCAGAGACAAGGATGTCCTTAAAAAGGTTAACGGAATATATGAGGTCCAAGGCTTGAGCTCTGAAAATTCCCTTAAGCTTTTTTGCTTGAATGCTTTTGACAAAGTCTATCCTGAAGTTGGATATGAAGAGGTTTCAAAAGTGGCAGTCGAGTATGCAAAAGGCGTCCCATTGGCTTTAAAAGTTTTGGGTTCGTATTTAAATTCTAAACCAACAGAAGAATGGGAAAGTGCTCTGGCAAAACTCAAGATATATCCTGATACAAAAATTTTTGATGTCTTGAAATTGAGTTATGATGGGCTTGATGAGCTAGAGAAGGAAATATTCCTTGACATTGTCTTCTTTTTCAAAGGAGAATACAAGGATGTTGTTATGCCATTTCTAGAAGCGTGTGGTTTTTTCCCTGCTAGTGGCATAGGCAATCTGTCTCGTAAAGGTCTTATAACTATTTCAAAATATAATAAAATAGAAATGCATGACTTGATAGAACAAATGGGTCGAGAAATAGTTCGTCAAGAATCCATTAAAGACCCAGGAAGACGAAGCCGCTTAAGTAACCCTGAGGATGTCTACGATGTATTGACTAGTAATAAGGGAAAAGAGTCAGTTGAAGGCATTATGTTGGACATGTCTCAAATTAAAAGAGATCTACATTTAGATGCTCACACTTTTAAAAAGATGCCTTATACAAGATTTCTCAAATTTCATTATTCACCGTGGTGGTGGTTCCCAAGATCAGCTAATGTTTACGTTTCTTCAACATTTGAGTCATTTCCAAATAAACTGAGATACTTGGAGTGGAGTGGCTGCCCTGTGAAGTCTCTTGGGCCAAATTTTTGTGCTGAGAATCTTGTTGAACTTAGTATGCCATGTAGCCAAGTTTGTAAACTTTGGGATGGAGTTCAGGATCTGGTGAATTTAAAGAAGATTGACCTTAGGGGATGCAAGCAGCTAGTGGAGCTTCCAGATTTCACTCTGGCATCAAACCTTAAAGGGATAGATCTCGCTTATTGTGAAAGGCTGCGTCAACTTCATCCATCCATGTTATCCATCCACAAGCTCGAAACCTTGAATGTTCGGGGTTGCGAAGCACTAGAGAGTCTTAAGAGCAAGATCCATTTGAAATCTCTTAGAATACTCAAAGCTGGTGACTGCTCAAGCTTGAAGGAATTTTCAGTGTCATCAGAGAAATTAACATGGTTGGATTTACAAAGTACAATGATCAAAATGTTACACTCATCAGTTGGCCGTCTCAGCAAACTTGTAGAGCTTGATCTCAGTGGTGTGAGAGTTGAAACTCTTCCAAACGAACTGTGCCTCTTAGTATCCCTTGAGGAACTAAATCTTAAAGGTAGCAAACAGTTGACTGAACTCCCTCGCAACATGAAAGCCTTATCGCGGTTACACAATCTCAACTTAACAGATTGTTGTAGCCTTCGATCTTTACCTGAGCTTCCACCGTCTATTATACACTTATGTGCCACCAACTGCACATCGCTGGAGAAATTATTCAATGCAAAGACAGTGTTCAGTTTAAATCTAATATCCTTCTCATTTGAAAACTGCAAGAGGCTTGATGAGCATTCATTCGCAAAATATGTGCATCATACAATGATGGGAGTGATAATTAGAGACTTGTTGAGTAAGATGCTAAATGATAAACGACCAGTACTTCAACTAGAGGAACTTGCATTTCATGTACCCAGGGTCAACGTTTGTTATGCCGGAAGCAAGGTTCCATCATGGTTCAAATATCAGACAGGAGAGAGTTGGGTAACTGTTGACCTTGTTGCGGATCAACCTCATTATCTTGAAAGGCTAGTGGGTTTCATAATGTGCTGTGTTGTTCATCTTATTCCTCCTCAAACCAAGGCTCTTCGAGAGGAGGCTCCCATGATCCGATGTAGATGCGATTTATGGCATAGTAAAAGGAGAGCTGAGAAGAGGGGATTGAGCTCAGACCATGTTTATATATGGTTTGAACAAGTTGGTCGTCAACATCGATTGCATGACAAGAATAATGTTACTTTTAAATTCGAAACTTATTGCAGATCATGGACATTCATTGCGTTGAAAGATGAACGGGAGGTGATAGGATGCGGGGTTTACCCAGTGTATGCCTCAAACATCTTGCAAGTCTTACAAAATGTGGATGCAGTGGATCCCAAGTTCCAGTTCTTTTATGATATGACCTGGCCCGAATTTTTGCGTAGTGGTAAACAACTGGTTTTCACTCTTGAAGAGCTAGAAAAGATCTCGTTTGAAGAACTAGAGAAGATTCTGTTTCACAAGAAGATTCACCCTGCTCCTGCTCCTCATCTTTTTGCAATTTGGAGGGGTTTAACTCTTGCTTGGGAGTGTGGCTGTAAGAATGTGATTTGTGAAACTGATTGCGTTAACGCCTTTTCATTGCTCACTAAGAAGTACATCCACATGAGTTGGTCTGACATTCGCAACATGATCCGGGATCACAATGATCTTGTAGCTAAGATTGATGATGTCTTGCATTGGGATTGGACAGCTATTTTTTCCCTCATTGAACCCAGGGCGAATACAGCAGCTGGCCTTATGGCGGAGAAGTCTGCTAGAGAGCAGCATGGTTATATTGAATGGCTCCAACTGTGA 3612 0.3929 MAYSSSSRSSSSSFNVPEIKHDVFISFRGEVRTSILSHLITRLKDEGIGYYFDEENLPAGDEISPTLLQAIEQSSISVVLFSENYASSRWCMEELVKIIECMEQYKRIVIPVFYKVDPSDVRHQKRTYEEAFHVHINKYKENLAKVQNWRCALRKTADLSGIHYPSNLIRNESKFIEEIVKYIYKKLPHISTRESNGLVGIDDGVRSIESLLRVESSEILRIIGIWGIGGIGKTTLAEFLFDKYSSRYEGSCMLRNVKESQKFGLSYLRDKLISELSDGERLSFKKSSKARKLSSKKVFIVLDDMDTLEQFEHLATKLLVGPGSRIIITSRDKDVLKKVNGIYEVQGLSSENSLKLFCLNAFDKVYPEVGYEEVSKVAVEYAKGVPLALKVLGSYLNSKPTEEWESALAKLKIYPDTKIFDVLKLSYDGLDELEKEIFLDIVFFFKGEYKDVVMPFLEACGFFPASGIGNLSRKGLITISKYNKIEMHDLIEQMGREIVRQESIKDPGRRSRLSNPEDVYDVLTSNKGKESVEGIMLDMSQIKRDLHLDAHTFKKMPYTRFLKFHYSPWWWFPRSANVYVSSTFESFPNKLRYLEWSGCPVKSLGPNFCAENLVELSMPCSQVCKLWDGVQDLVNLKKIDLRGCKQLVELPDFTLASNLKGIDLAYCERLRQLHPSMLSIHKLETLNVRGCEALESLKSKIHLKSLRILKAGDCSSLKEFSVSSEKLTWLDLQSTMIKMLHSSVGRLSKLVELDLSGVRVETLPNELCLLVSLEELNLKGSKQLTELPRNMKALSRLHNLNLTDCCSLRSLPELPPSIIHLCATNCTSLEKLFNAKTVFSLNLISFSFENCKRLDEHSFAKYVHHTMMGVIIRDLLSKMLNDKRPVLQLEELAFHVPRVNVCYAGSKVPSWFKYQTGESWVTVDLVADQPHYLERLVGFIMCCVVHLIPPQTKALREEAPMIRCRCDLWHSKRRAEKRGLSSDHVYIWFEQVGRQHRLHDKNNVTFKFETYCRSWTFIALKDEREVIGCGVYPVYASNILQVLQNVDAVDPKFQFFYDMTWPEFLRSGKQLVFTLEELEKISFEELEKILFHKKIHPAPAPHLFAIWRGLTLAWECGCKNVICETDCVNAFSLLTKKYIHMSWSDIRNMIRDHNDLVAKIDDVLHWDWTAIFSLIEPRANTAAGLMAEKSAREQHGYIEWLQL 1203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181283g00010 1203 PRINTS Disease resistance protein signature 631 647 - -
Stsc181283g00010 1203 PRINTS Disease resistance protein signature 222 237 - -
Stsc181283g00010 1203 PRINTS Disease resistance protein signature 292 306 - -
Stsc181283g00010 1203 PRINTS Disease resistance protein signature 382 396 - -
Stsc181283g00010 1203 SUPERFAMILY Toll/Interleukin receptor TIR domain 10 161 IPR035897 -
Stsc181283g00010 1203 FunFam Disease resistance protein (TIR-NBS-LRR class) 17 189 - -
Stsc181283g00010 1203 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 21 721 IPR044974 GO:0006952
Stsc181283g00010 1203 Pfam Reverse transcriptase-like 1103 1184 IPR002156 GO:0003676|GO:0004523
Stsc181283g00010 1203 Pfam TIR domain 20 199 IPR000157 GO:0007165
Stsc181283g00010 1203 Gene3D - 16 189 IPR035897 -
Stsc181283g00010 1203 SMART till_3 20 159 IPR000157 GO:0007165
Stsc181283g00010 1203 Pfam NB-ARC domain 209 412 IPR002182 GO:0043531
Stsc181283g00010 1203 Pfam Leucine Rich Repeat 612 631 IPR011713 -
Stsc181283g00010 1203 Pfam C-JID domain 904 1037 IPR045344 -
Stsc181283g00010 1203 SUPERFAMILY L domain-like 487 854 - -
Stsc181283g00010 1203 Gene3D - 190 345 IPR027417 -
Stsc181283g00010 1203 Gene3D Ribonuclease Inhibitor 535 701 IPR032675 -
Stsc181283g00010 1203 Gene3D Ribonuclease Inhibitor 702 856 IPR032675 -
Stsc181283g00010 1203 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 187 441 IPR027417 -
Stsc181283g00010 1203 Gene3D - 347 431 IPR042197 -
Stsc181283g00010 1203 ProSiteProfiles TIR domain profile. 19 187 IPR000157 GO:0007165
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181283g00010 Stsc-Chr181283 71719 80320 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181283g00010 21 823 WRKY Transcription Factor Family AT4G12020 34.499 7.44e-98 342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181283g00010 - - ahf:112729160 1317.75