Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181279g00031 ATGTTGCTTGCTTCTTACACCACAAAAATTCCCTTCTTCCTTTTCCTCTTCCACTTCCAGATTCTCCCCTTCCAAGCACACTCTTGGGTACAAGCTGGTTACTGGTTTTATGGTTCTGGCTTTCCCGTTTCTAACATAACAACTTCTCTCTACACTCACCTCCTATGTGCTTTTGCTGATGTCAACTCTTCAACCTATCAACTTTCCATTCCTTCAGATGCTGAAGCATCATTTCCTTCATTCACTGCCACTCTTAAGCGCACCAATCCATCTCTAGTTACACTTCTTTCCATTGGTGGTGGCAGTTCTAACTACACTGTCTTATCTTCAATGGTAAGCAATGCTTCTTCAAGAAAATCTTTCATTCACTCTTCAATCAAAGTGGCTAGAACCTATGGCTTCCAAGGCCTTGATCTTTCATGGGTTTCTGCCAACACTAGCAATGACTTGAACAATATGGGTTTGCTCTTTCAAGAGTGGAGAGCAGCTGCAAAATCTGAGGCAATAAACTCCAGCAATACTAATCAAGAACTGATTTTAACTGCGGCTGTTCCATATCAACCAGGTTCTGATTTTGGTTCTTACCCTGTGGATTCTATTAGAGATAACTTGAATTGGGTAAATGTTTTGGATTATGATTACTACATACCCCGGTCAACAAATTTTACTGGAGCTCATTCAGCCTTGTATGATCCTTCTAGTGATGTCAACACCAACACCGGAATCAAGCGATGGATAGATAGTGGGGTACCTGCTAGCAAGTTGGTTTTGTCTTTACCTTTCTATGGATATGCATGGAAGCTTAGGAACCAAAGGGAGAATGGAATAGGTGCAGCAGCAACAGGTCCAGCTATCACTGCAGGAGGAGACATGACCTACAAGGAGATCAAGGATTATGTTCAAAGATATGGAGCAACTGTGTTGTATAATGCTACTTATGTGGTCAATTATTGTTCAGTTGGATCAAATTGGATAGGTTTTGATGATGTTGGTGCTGTGAAAACTAAGGTGTCTTATGCTAAAGAAAATAATCTAGGTGGTTATGTTGTATGGCAAGTTCCCGATGATGATGACAAATGGTCACTTTCTAGTGCTGCAGGAATCATAAATGCGGCTAGAGATGCAGGACAGTTTCCTGATTGTGTTCCTGATGTGCAAGTCTTTAGCTTCTATGATATTGAGCTAGCCACTGATAGATTTTCTATCGAAAACAAGCTTGGTCAGGGTGGCTATGGTCCTGTTTTCAAGGGCATATTACCAGATGGCAGGGAAATAGCAGTGAAGAAGTTATCAAAGGCTTCAACACAAGGATTTGAGGAATTCAAGAATGAGGTAACACTGACTGCAAGGCTACAGCATGTGAATCTTGTTAGGTTGCTGGGTTTCTACATTGACAGTGAAGAACAGATGTTGGTTTATGAGTACATGACAAACAAAAGCCTTGACTACTATCTCTTTGACCCTATCAGGCGATTTCTTCTGGATTGGAGCAAGCGTGTAGCTATCATTGAGGGTGTTACTCAGGGACTACTTTATCTGCAAGAATATTCTAGATTGACAATAATTCATAGAGATATAAAAGCTAGCAACATTCTGTTAGATGATGAGATGAAACCAAAGATCTCAGATTTCGGTATGGCAAGAATATTCTCAAAAGATGAGCAAGAAGCAAACACTGCCAAGATTGTTGGAACATATGGTTATGTCTCTCCTGAATACATTAAAAAAGGCTTGTATTCTGTAAAATCTGATGTGTATAGCTTCGGAGTTCTACTTCTGCAAATTATAAGTGGCAAGGTAACAGCAAGGTATTATGGCGAGCACGAAAATTTGAACTTGATGGAATGTGCTTATGATTTGTGGAAAGAAGGAAGAGGCATGGAGTTTGCAGATCCTTTTCTCAATGACACAGATTCAGCTTGCAAAATACTGAGGTGCATACAAATAGGTCTATTATGTGTGCAAGAAGACGCCAATGACAGGCCATCTGTGTTGGAAATTTCTTCAATGTTAAGAAGTGAAGCTATTCTTGCTATACCAAAGAAGCCAGCGTTTTCACGAGAAGAAGATCTGCAGGTGCCAGATGAATTTGTTATGAAGCAAGAACATTATTCAGTTAACCAAGCAACAATGTCTCAGATTGTGGCACGATAG 2154 0.403 MLLASYTTKIPFFLFLFHFQILPFQAHSWVQAGYWFYGSGFPVSNITTSLYTHLLCAFADVNSSTYQLSIPSDAEASFPSFTATLKRTNPSLVTLLSIGGGSSNYTVLSSMVSNASSRKSFIHSSIKVARTYGFQGLDLSWVSANTSNDLNNMGLLFQEWRAAAKSEAINSSNTNQELILTAAVPYQPGSDFGSYPVDSIRDNLNWVNVLDYDYYIPRSTNFTGAHSALYDPSSDVNTNTGIKRWIDSGVPASKLVLSLPFYGYAWKLRNQRENGIGAAATGPAITAGGDMTYKEIKDYVQRYGATVLYNATYVVNYCSVGSNWIGFDDVGAVKTKVSYAKENNLGGYVVWQVPDDDDKWSLSSAAGIINAARDAGQFPDCVPDVQVFSFYDIELATDRFSIENKLGQGGYGPVFKGILPDGREIAVKKLSKASTQGFEEFKNEVTLTARLQHVNLVRLLGFYIDSEEQMLVYEYMTNKSLDYYLFDPIRRFLLDWSKRVAIIEGVTQGLLYLQEYSRLTIIHRDIKASNILLDDEMKPKISDFGMARIFSKDEQEANTAKIVGTYGYVSPEYIKKGLYSVKSDVYSFGVLLLQIISGKVTARYYGEHENLNLMECAYDLWKEGRGMEFADPFLNDTDSACKILRCIQIGLLCVQEDANDRPSVLEISSMLRSEAILAIPKKPAFSREEDLQVPDEFVMKQEHYSVNQATMSQIVAR 717
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181279g00031 717 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 384 692 - -
Stsc181279g00031 717 SMART 2g34 29 356 IPR011583 GO:0008061
Stsc181279g00031 717 CDD GH18_plant_chitinase_class_V 28 362 - -
Stsc181279g00031 717 ProSitePatterns Serine/Threonine protein kinases active-site signature. 521 533 IPR008271 GO:0004672|GO:0006468
Stsc181279g00031 717 Gene3D - 261 327 IPR029070 -
Stsc181279g00031 717 FunFam Uncharacterized protein 476 681 - -
Stsc181279g00031 717 ProSiteProfiles Protein kinase domain profile. 400 677 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181279g00031 717 FunFam Chitotriosidase-1 261 327 - -
Stsc181279g00031 717 CDD STKc_IRAK 406 671 - -
Stsc181279g00031 717 SUPERFAMILY (Trans)glycosidases 32 365 IPR017853 -
Stsc181279g00031 717 Gene3D Transferase(Phosphotransferase) domain 1 476 680 - -
Stsc181279g00031 717 SUPERFAMILY Protein kinase-like (PK-like) 382 679 IPR011009 -
Stsc181279g00031 717 FunFam Uncharacterized protein 379 475 - -
Stsc181279g00031 717 ProSiteProfiles Glycosyl hydrolases family 18 (GH18) domain profile. 29 373 IPR001223 GO:0005975
Stsc181279g00031 717 SMART serkin_6 400 676 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181279g00031 717 SUPERFAMILY Chitinase insertion domain 262 327 IPR029070 -
Stsc181279g00031 717 Pfam Glycosyl hydrolases family 18 33 355 IPR001223 GO:0005975
Stsc181279g00031 717 Gene3D Glycosidases 43 357 - -
Stsc181279g00031 717 Pfam Protein kinase domain 401 667 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181279g00031 717 Gene3D Phosphorylase Kinase; domain 1 372 475 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181279g00031 Stsc-Chr181279 131655 134619 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181279g00031 388 717 Receptor kinase-like Gene Family AT4G11530 51.335 2.60e-109 345
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Stsc181279g00031 Glyco_hydro_18 2.1e-65 CL0058
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181279g00031 - - gmx:100787480 978.393