Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181279g00025 ATGGAAGAAGCTTCAGAGATTCAAGGTTTAACCGAGTTCCAGGGTTTCTTCGCATTGCAGCTGCCACCGCATACGCTCTGCGCTGAGAGAATGCCTTCACACAAGACGTTCAGGATCAAGAAGAAGCTGGCGAAGAAGATGAGGCAGAACAGGCCCATCCCTTACTGGATCCGCATGAGGACCGACAACACCATCAGGTACAATGCGAAGCGCAGGCACTGGCGCCGCACAAAGCTAGGGTTCTAA 246 0.5285 MEEASEIQGLTEFQGFFALQLPPHTLCAERMPSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF 81
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181279g00025 81 ProSitePatterns Ribosomal protein L39e signature. 60 76 IPR020083 GO:0003735|GO:0005840|GO:0006412
Stsc181279g00025 81 SUPERFAMILY Ribosomal protein L39e 33 80 IPR023626 -
Stsc181279g00025 81 PANTHER RIBOSOMAL PROTEIN L39E 23 81 - -
Stsc181279g00025 81 Gene3D Ribosomal protein L39e 31 81 IPR023626 -
Stsc181279g00025 81 Pfam Ribosomal L39 protein 39 79 IPR000077 GO:0003735|GO:0005840|GO:0006412
Stsc181279g00025 81 Hamap 50S ribosomal protein L39e [rpl39e]. 31 81 IPR000077 GO:0003735|GO:0005840|GO:0006412
Stsc181279g00025 81 FunFam 60S ribosomal protein-like L39 31 81 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181279g00025 31 81 Cytoplasmic Ribosomal Protein Gene Family AT4G31985 90.196 1.00e-29 98.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181279g00025 K02924 - gmx:100807176 112.849