Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Stsc181279g00025 | ATGGAAGAAGCTTCAGAGATTCAAGGTTTAACCGAGTTCCAGGGTTTCTTCGCATTGCAGCTGCCACCGCATACGCTCTGCGCTGAGAGAATGCCTTCACACAAGACGTTCAGGATCAAGAAGAAGCTGGCGAAGAAGATGAGGCAGAACAGGCCCATCCCTTACTGGATCCGCATGAGGACCGACAACACCATCAGGTACAATGCGAAGCGCAGGCACTGGCGCCGCACAAAGCTAGGGTTCTAA | 246 | 0.5285 | MEEASEIQGLTEFQGFFALQLPPHTLCAERMPSHKTFRIKKKLAKKMRQNRPIPYWIRMRTDNTIRYNAKRRHWRRTKLGF | 81 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Stsc181279g00025 | 81 | ProSitePatterns | Ribosomal protein L39e signature. | 60 | 76 | IPR020083 | GO:0003735|GO:0005840|GO:0006412 | |
Stsc181279g00025 | 81 | SUPERFAMILY | Ribosomal protein L39e | 33 | 80 | IPR023626 | - | |
Stsc181279g00025 | 81 | PANTHER | RIBOSOMAL PROTEIN L39E | 23 | 81 | - | - | |
Stsc181279g00025 | 81 | Gene3D | Ribosomal protein L39e | 31 | 81 | IPR023626 | - | |
Stsc181279g00025 | 81 | Pfam | Ribosomal L39 protein | 39 | 79 | IPR000077 | GO:0003735|GO:0005840|GO:0006412 | |
Stsc181279g00025 | 81 | Hamap | 50S ribosomal protein L39e [rpl39e]. | 31 | 81 | IPR000077 | GO:0003735|GO:0005840|GO:0006412 | |
Stsc181279g00025 | 81 | FunFam | 60S ribosomal protein-like L39 | 31 | 81 | - | - |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Stsc181279g00025 | 31 | 81 | Cytoplasmic Ribosomal Protein Gene Family | AT4G31985 | 90.196 | 1.00e-29 | 98.2 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Stsc181279g00025 | K02924 | - | gmx:100807176 | 112.849 |