Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181279g00006 ATGGAAATAGCAAAGACAAAAGCCGAAGGAGAAGAATTGTTGGATTGGAAAGATGTGAACAAGATGAGATACTCATGGAATGTAGCTTGCGAAGTAATGAGAATCAACCCTATAACACCTGGAGGATTCAGGGAAGCCATCGACGACTTTACCTTCAACGGATTCTCAATTCCAAAAGGATGGAAGTTGTTTTGGAGTGCAAATTCAACACATAAGAATGAGAAGTACTTTCCAGAGCCAGAGAAATTCGATCCAAGTAGATTCGAAGGAAATGGACCAGCTCCTTACACATTTGTGCCATTTGGCGGTGGGCCTAGGATTTGTCCAGGAAATGAGTATGCGAGGCTAGTAATAATGGTGTTCTTGCACAATTTTGTAAAACGCTTCAAATGGCAAGTCTTGAATCCGAATGAGAACATCGTTGTTGATCCTTTTCCTGTGCCTGCAAATCATCTACCAATTCGTCTTTATCCTCATCACAAAGCGGACTAG 492 0.4167 MEIAKTKAEGEELLDWKDVNKMRYSWNVACEVMRINPITPGGFREAIDDFTFNGFSIPKGWKLFWSANSTHKNEKYFPEPEKFDPSRFEGNGPAPYTFVPFGGGPRICPGNEYARLVIMVFLHNFVKRFKWQVLNPNENIVVDPFPVPANHLPIRLYPHHKAD 163
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181279g00006 163 PRINTS E-class P450 group I signature 98 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181279g00006 163 PRINTS E-class P450 group I signature 66 90 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181279g00006 163 PRINTS E-class P450 group I signature 108 131 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181279g00006 163 Gene3D Cytochrome P450 1 158 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181279g00006 163 PANTHER CYTOCHROME P450 26 1 148 - -
Stsc181279g00006 163 SUPERFAMILY Cytochrome P450 8 158 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Stsc181279g00006 163 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 101 110 IPR017972 GO:0005506|GO:0016705
Stsc181279g00006 163 Pfam Cytochrome P450 9 137 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181279g00006 Stsc-Chr181279 10520 11189 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181279g00006 14 159 Cytochrome P450 AT3G19270 45.205 2.89e-38 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181279g00006 K20667 - ccaj:109799754 282.337