Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181278g00022 ATGAAGCTGTGTTGCGTTTGGTGTTTGTTTGTACGTTGCATAATAATATTGTTAGGAGGTGTTTTATGGAAAACAGAGGGTGTGGTGAAATTGCCAGCGAATGTAAGTGTTCCGGCAGTGTTTGTGTTTGGAGATTCAATCGTCGACACTGGAAACAACAACGATATCTTGCTAACCACCGCCAAATGCAACTTCCCACCGTATGGGAAAGATTTCATGGGAGGCAAGGCAACAGGGCGCTTCAGCAATGGCAAGGTTCCATCAGACCTTATTGTTGAAGATTTAGGGATTAAAGAGTTTCTACCAGCATACTTGGATCCAAATCTGAAATCTAGTGATTTGCTTACTGGGGTTAATTTTGCATCTGGTGGTGCTGGATATGACTCTCTCACTTCACAAACAGCGTCTGCTATATCTATATCGGGACAAGTAGATTTGTTCAAAGAATACATAGGCAAGCTTAAAGGATTGGTGGGAGAAGAGAGAGCCAATTTCATCATAAACAACAGCTTCTATATCATCGTTTTTGGAAGCAATGACATTTCCAACACATACTTCTTGTCTCGCATCAGACAGTTACAATATGACGTACCTTCTTACACTAACCTCCTTCTTCAATCAGCTTCTAATTTCTTCAAGGAACTATACGAGCTTGGTGCAAGGAGGGTTGCAATATTCAATATTCCACCACTTGGGTGCATTCCATTTCAGAGGACGGCTGCTGGTGGAATAGAAAGAAATTGTGCACAAAACATAAATGATGCTGCACGGTTCTTTAATGCCAAACTCGAGGACCAGATTGATTCCTTTAATCAACAATTTCCAGATGCCAGGAATGTTTACATTGATGTTTACACCCCTCTTCTTGATATCATTCTCAACTACCAAAAATATGGTTTTAAAGTGGGAAACAGAGGTTGCTGTGGAAGTGGGATAATAGAGGTGGTGGCATTATGCAATCGATTTGTTCCATTATGTCCCAATGATTTGGAGTATGTCTTCTGGGATAGCTTTCATCCTACTGAGATCGTTTACAAAACCCTCATTTCTCCTATTGTCTCTAAATATCTCTCTAAGTTCTTGTGA 1086 0.4052 MKLCCVWCLFVRCIIILLGGVLWKTEGVVKLPANVSVPAVFVFGDSIVDTGNNNDILLTTAKCNFPPYGKDFMGGKATGRFSNGKVPSDLIVEDLGIKEFLPAYLDPNLKSSDLLTGVNFASGGAGYDSLTSQTASAISISGQVDLFKEYIGKLKGLVGEERANFIINNSFYIIVFGSNDISNTYFLSRIRQLQYDVPSYTNLLLQSASNFFKELYELGARRVAIFNIPPLGCIPFQRTAAGGIERNCAQNINDAARFFNAKLEDQIDSFNQQFPDARNVYIDVYTPLLDIILNYQKYGFKVGNRGCCGSGIIEVVALCNRFVPLCPNDLEYVFWDSFHPTEIVYKTLISPIVSKYLSKFL 361
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181278g00022 361 Pfam GDSL-like Lipase/Acylhydrolase 40 349 IPR001087 GO:0016788
Stsc181278g00022 361 FunFam GDSL esterase/lipase APG 29 357 - -
Stsc181278g00022 361 Gene3D SGNH hydrolase 28 357 IPR036514 -
Stsc181278g00022 361 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 40 51 IPR008265 GO:0006629|GO:0016298
Stsc181278g00022 361 PANTHER GDSL ESTERASE/LIPASE EXL3 12 351 - -
Stsc181278g00022 361 SUPERFAMILY SGNH hydrolase 39 355 - -
Stsc181278g00022 361 CDD SGNH_plant_lipase_like 38 356 IPR035669 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181278g00022 Stsc-Chr181278 95750 98418 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181278g00022 8 353 Pollen Coat Proteome AT1G75910 40.688 3.12e-77 239
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181278g00022 - - gmx:100776769 531.561