Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181278g00020 ATGGTTCATTTGATGTTACTATTGAGCTTGTGCAAGACAACGAAAGGTGTGATGCAGCTACCAGCAAATGTTTCAGTTCCAGCGGTGCTAGCATTCGGAGACTCAATCATGGACACTGGAAACAACAACGGCTTAAAAACGCTGGTAAAGTGCAACTTCCCTCCTTATGGCAAAGATTTTGAGGGTGGAACCCCAACCGGTCGCTTTTGCAATGGAAAAGTTCCATCTGACCTCTTAGTTGAAGAACTAGGAATCAAGGAATACATGGCAGCTTATTTGGATCCGAATGTGAAAGAGAGTGATCTTGTGAGCGGTGTGTGTTTTGCCTCCGGTGCTTCAGGATATGATCCTTTGACACCTAAAATAGCGTCAGTAATACCAATGTCAGATCAATTGGACATGTTCAAGGAATACATAGGGAAGTTGAAAGGCATCGTTGGAGAGGAGAGAACAAACTTCATCATAAGCAACAGTCTGTACGTAGTGGTGGCTGGGAGCGATGACATTGCAAACACGTACTTTGTAGTTCACGCAAGAATAGAGTACGATATTCCAGCTTACACCGACCTTATGTCCAATTCAGCAACAAATTTTGTTAAGGAACTATACAAATTGGGGGCTCGAAGAATAGCAGTGCTGAGTGCACCACCAATTGGATGCGTACCTTCACAGAGAACACTCGCTGGAGGGATAGTGAGAAAGTGCTCAGAAAAGTACAATGAGGCTGCTAAATTGTTTAACTCCAAATTGGAAAAGGACCTGGATTCCCTTAATCGCAACTCTCCCCATGCCCGCATTGTCTACATTGATGTTTACAACCCTCTGCTTGATATCATTCTCAACTACCAAAATTATGGGTATAAAGTTGTGGACAGAGGTTGCTGTGGGACAGGGAAACTGGAGGTTGCAGTGTTATGCAACCCTTTGGATTCAACTTGCCCTAATCCTTCCGAATATGTTTTTTGGGATAGTTATCATCCCACAGAAGGAGTATACAGAATATTAATATCTCAAGTTCTTAACAAGTATTTCAATCAATTGTTGGGTCACCTTCCATGA 1059 0.4278 MVHLMLLLSLCKTTKGVMQLPANVSVPAVLAFGDSIMDTGNNNGLKTLVKCNFPPYGKDFEGGTPTGRFCNGKVPSDLLVEELGIKEYMAAYLDPNVKESDLVSGVCFASGASGYDPLTPKIASVIPMSDQLDMFKEYIGKLKGIVGEERTNFIISNSLYVVVAGSDDIANTYFVVHARIEYDIPAYTDLMSNSATNFVKELYKLGARRIAVLSAPPIGCVPSQRTLAGGIVRKCSEKYNEAAKLFNSKLEKDLDSLNRNSPHARIVYIDVYNPLLDIILNYQNYGYKVVDRGCCGTGKLEVAVLCNPLDSTCPNPSEYVFWDSYHPTEGVYRILISQVLNKYFNQLLGHLP 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181278g00020 352 PANTHER GDSL ESTERASE/LIPASE EXL3 9 339 - -
Stsc181278g00020 352 SUPERFAMILY SGNH hydrolase 159 341 - -
Stsc181278g00020 352 Gene3D SGNH hydrolase 16 344 IPR036514 -
Stsc181278g00020 352 Pfam GDSL-like Lipase/Acylhydrolase 29 337 IPR001087 GO:0016788
Stsc181278g00020 352 Coils Coil 240 260 - -
Stsc181278g00020 352 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 29 40 IPR008265 GO:0006629|GO:0016298
Stsc181278g00020 352 CDD SGNH_plant_lipase_like 27 343 IPR035669 -
Stsc181278g00020 352 FunFam GDSL esterase/lipase APG 18 344 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181278g00020 Stsc-Chr181278 81756 84047 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181278g00020 23 347 Pollen Coat Proteome AT1G75910 42.249 1.10e-80 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181278g00020 - - ahf:112759151 632.869