Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181278g00019 ATGTTTGCAATAGCAGCAGCAAATGGTGGGCAATATCCAGCATTATTTGCCTTTGGAGATTCCATTCTTGATACCGGAAATAACAACAACCTTGCAACTATAACCAAGTGTAATTTTCCTCCTTACGGAAGAGATTTCGTTGGAGGAACACCAACAGGCAGATTCTGCGATGGCAAAGTCCCTTCAGATCTTATAGCGGGATCTCTTGGAATCAAAGAGACGTTACCTGCATATCTTGATCTAAATTTGCGGAATGAAGATATTCCGACGGGTGTAAGCTTTGCTTCAGGCGGAACAGGAAATGATATTCTGACGGCTCAATTGCAGGGTGTTTTATCACTACCGGCACAACTGAAAAATTTCCAAGAGTACATTGGAAGGCTGAAAGCATTAGTTGGAGAAGAAAGAGCGAATAACATCATATCAAACAGTTTGTATCTGCTTTCATCAGGAAACAATGATATTGCCATCACTTATGCTAATTCACCATTGAGAAAAGTCATACCTTTCCCTCAATATGCTTCTCAATTAGTTTCCTGGGCCTCAGATTTCCTGAAGCAACTATACGGTGCTGGAGCAAGAAACGTGTGGGTTCTAAGTACATTGCCATTGGGTTGCTTGCCCGGAGGTAGAACTGCAGCTGGAGGACCTTTGAGATTTTGTGCTGATTTTGTGAATGGACAAGCTCAATTATTCAATTCCCAATTATCATCAGCTGTTACTTCTTTGCAAAGCACACTTTCTGGTTCTAACCTTCAATTCATTGATGTCTATGATGCACTCCTTAACATCATAAATAATCCTCTTAGTTCAGGCTTTGCAAATGTTGCAAGTGGATGTTGTGGAACTGGACTTTTTGAGATTGGAGCGACATGTAACTTAGCCGTTGGTTCCTGCCCATATCCTGCTTCATTTGTTTTCTGGGACGCTGGTCATCCAACTCAAAGGGCCTATCAGCTCATTGTCTCTTCTATACTACACCAAAATACTACTCGTCTTTCCAAATAA 1008 0.4137 MFAIAAANGGQYPALFAFGDSILDTGNNNNLATITKCNFPPYGRDFVGGTPTGRFCDGKVPSDLIAGSLGIKETLPAYLDLNLRNEDIPTGVSFASGGTGNDILTAQLQGVLSLPAQLKNFQEYIGRLKALVGEERANNIISNSLYLLSSGNNDIAITYANSPLRKVIPFPQYASQLVSWASDFLKQLYGAGARNVWVLSTLPLGCLPGGRTAAGGPLRFCADFVNGQAQLFNSQLSSAVTSLQSTLSGSNLQFIDVYDALLNIINNPLSSGFANVASGCCGTGLFEIGATCNLAVGSCPYPASFVFWDAGHPTQRAYQLIVSSILHQNTTRLSK 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181278g00019 335 ProSitePatterns Lipolytic enzymes "G-D-S-L" family, serine active site. 15 26 IPR008265 GO:0006629|GO:0016298
Stsc181278g00019 335 CDD SGNH_plant_lipase_like 13 327 IPR035669 -
Stsc181278g00019 335 Gene3D SGNH hydrolase 3 332 IPR036514 -
Stsc181278g00019 335 FunFam GDSL esterase/lipase APG 4 330 - -
Stsc181278g00019 335 PANTHER GDSL ESTERASE/LIPASE EXL3 12 324 - -
Stsc181278g00019 335 SUPERFAMILY SGNH hydrolase 144 326 - -
Stsc181278g00019 335 Pfam GDSL-like Lipase/Acylhydrolase 15 323 IPR001087 GO:0016788
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181278g00019 Stsc-Chr181278 69085 70948 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181278g00019 2 328 Pollen Coat Proteome AT1G75910 41.742 5.86e-82 251
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181278g00019 - - aip:107646231 527.709