Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181278g00013 ATGGCAGCAATAATTATTATTGCCTTAGTGGTGATGACCATAATGGTGTCCTTCACTTCTCTAGCAGGTGCATCATTAAGTGTGGATCACTATCAACACACATGTCCTCAGGTAGAGTCAATTGTTTCGGGTGCTGTGCATAAGGCAGCCATGAATGATATAACTGTCCCTGCTGCTCTACTTCGGATGCATTTTCATGATTGCTTCATAAGGGGTTGTGACGGGTCTGTTCTACTGGAATCAAAAGGAAATAATAAAGCAGAAAAGGATGGACCAGCCAACATATCATTGCATGCATTCTATGTGATTGATAACGCCAAGAAAGCAATTGAAGCCGTTTGTCCCGGAGTCGTATCATGTGCTGATGTTTTGGCTCTTGCTGCAAGGGATGCTGTTCATCTGACTGGAGGACCCTATTGGGATGTGCCTAAAGGAAGAAAAGATGGAAGAATATCAAAGGCCATTGAAACAAGACAACTGCCAGCTCCAACCTTCAACATATCTCAATTACAACAAAGCTTCTCTCAGAGAGGCCTTTCCATGGAAGATCTTGTGGCCCTCTCAGGTGCCCACACCCTGGGCTTTGCTCACTGTTCATCTTTCCAAAACAGGATTCACAACTTCGCCCCCAACAAAGACGTGGACCCTTCCTTGAACCCATCCTTTGCCACCAACCTCAGAACCATATGTCCCTTTCACAACAAGGCCAAAAATGCAGGTTCCCCCTTGGACTCAACCAACACCCTCTTTGACAATGCTTATTACAAGCTCATCCTCCAAGGCAAGGCCATCTTCTCTTCGGATCAAGCACTTGTCAATAATCCCAAAACTAAATCCTTGGTTTCAAAGTTTGCCAATGCCAAAAAGGACTTTGAAAATGCGTTTGTCAAGTCCATGATCAAAATGAGCAGCATCAGCGCAGCAGGTGGTGGACAAGAGATCAGGCTCCATTGTAAACACGTCAATTAG 969 0.4489 MAAIIIIALVVMTIMVSFTSLAGASLSVDHYQHTCPQVESIVSGAVHKAAMNDITVPAALLRMHFHDCFIRGCDGSVLLESKGNNKAEKDGPANISLHAFYVIDNAKKAIEAVCPGVVSCADVLALAARDAVHLTGGPYWDVPKGRKDGRISKAIETRQLPAPTFNISQLQQSFSQRGLSMEDLVALSGAHTLGFAHCSSFQNRIHNFAPNKDVDPSLNPSFATNLRTICPFHNKAKNAGSPLDSTNTLFDNAYYKLILQGKAIFSSDQALVNNPKTKSLVSKFANAKKDFENAFVKSMIKMSSISAAGGGQEIRLHCKHVN 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181278g00013 322 CDD secretory_peroxidase 26 321 IPR033905 GO:0004601|GO:0042744
Stsc181278g00013 322 Gene3D - 29 322 - -
Stsc181278g00013 322 SUPERFAMILY Heme-dependent peroxidases 26 322 IPR010255 GO:0004601|GO:0006979|GO:0020037
Stsc181278g00013 322 PRINTS Haem peroxidase superfamily signature 183 198 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc181278g00013 322 PRINTS Haem peroxidase superfamily signature 136 148 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc181278g00013 322 PRINTS Haem peroxidase superfamily signature 57 71 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc181278g00013 322 PRINTS Haem peroxidase superfamily signature 243 258 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc181278g00013 322 PRINTS Haem peroxidase superfamily signature 118 135 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc181278g00013 322 ProSiteProfiles Plant heme peroxidase family profile. 25 322 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc181278g00013 322 Gene3D Peroxidase, domain 2 161 302 - -
Stsc181278g00013 322 PRINTS Plant peroxidase signature 241 256 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc181278g00013 322 PRINTS Plant peroxidase signature 297 310 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc181278g00013 322 PRINTS Plant peroxidase signature 117 127 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc181278g00013 322 PRINTS Plant peroxidase signature 35 54 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc181278g00013 322 PRINTS Plant peroxidase signature 59 79 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc181278g00013 322 PRINTS Plant peroxidase signature 182 194 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc181278g00013 322 PRINTS Plant peroxidase signature 136 151 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc181278g00013 322 PRINTS Plant peroxidase signature 98 111 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc181278g00013 322 PRINTS Plant peroxidase signature 257 274 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc181278g00013 322 Pfam Peroxidase 45 286 IPR002016 GO:0004601|GO:0006979|GO:0020037
Stsc181278g00013 322 FunFam Peroxidase 29 173 - -
Stsc181278g00013 322 FunFam Peroxidase 161 302 - -
Stsc181278g00013 322 PANTHER PEROXIDASE 25-RELATED 13 310 IPR000823 GO:0004601|GO:0006979|GO:0020037
Stsc181278g00013 322 ProSitePatterns Peroxidases proximal heme-ligand signature. 183 193 IPR019793 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181278g00013 Stsc-Chr181278 48548 50324 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181278g00013 1 321 Peroxidase AT5G42180 69.782 3.07e-167 466
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181278g00013 K00430 - gmx:100820056 472.626