Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181278g00003 ATGGCAGCTGTGAAAGTGTACGGACCAAGCCTGTCGACTGCGGTTTCAAGGGTGCTGGCCTGTCTGATCGAGAAAGATGTGCAGTTTGAGCTCATTCCGGTGGATATGTCCAAAGGAGAACACAAGAGGCCTCAATTCCTCTCCCTTCAGCCCTTTGGACAAGTCCCTGCATTTCAAGACGGCAACATCTCCCTCTTCGAGTCAAGAGCCATATGCAAATATGTATGTGAGAAATACGGGGAGAGGGGGAACAAGGGATTGTACGGAATGAACCCATTGGCGAAGGCGTCAATAGATCAGTGGGTGGAGGCTGAGGGTCAGAGCTTCAACCCCCCAAGCTCAGCGCTCGTGTTCCAGCTGGCATTCGCCCCAAGAATGAAGCTGAAGCAGGACCAAGGAGTGATTAGGCAGAACCAGGACAAGCTTGGGAAGGTGCTTGACGTCTACGACAAGAGGCTCGCTCAGACTCGTTTCTTGGCTGGCGATGACTTCTCTCTCGCTGACCTCTCTCACCTTCCCAATGCCCACTACTTGGTCACTGCCACCGACATGGCCCAACTCTTCACCCAAAGGGACAACGTCTCTAGGTGGTGGAACGACATCTCCACCCGTGATTCCTGGATCAAGGTCCTTCATTTCCACAAAACTACTAAATAG 657 0.5251 MAAVKVYGPSLSTAVSRVLACLIEKDVQFELIPVDMSKGEHKRPQFLSLQPFGQVPAFQDGNISLFESRAICKYVCEKYGERGNKGLYGMNPLAKASIDQWVEAEGQSFNPPSSALVFQLAFAPRMKLKQDQGVIRQNQDKLGKVLDVYDKRLAQTRFLAGDDFSLADLSHLPNAHYLVTATDMAQLFTQRDNVSRWWNDISTRDSWIKVLHFHKTTK 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181278g00003 218 PANTHER GLUTATHIONE S-TRANSFERASE RHO 3 212 - -
Stsc181278g00003 218 CDD GST_C_Phi 93 211 IPR034347 -
Stsc181278g00003 218 Gene3D - 90 211 - -
Stsc181278g00003 218 Pfam Glutathione S-transferase, N-terminal domain 4 75 IPR004045 -
Stsc181278g00003 218 SFLD Glutathione Transferase (cytosolic) 1 214 IPR040079 -
Stsc181278g00003 218 SFLD Main.5: Phi-like 1 214 - -
Stsc181278g00003 218 FunFam Glutathione S-transferase F2 3 87 - -
Stsc181278g00003 218 Pfam Glutathione S-transferase, C-terminal domain 115 205 IPR004046 -
Stsc181278g00003 218 SUPERFAMILY Thioredoxin-like 2 83 IPR036249 -
Stsc181278g00003 218 FunFam Glutathione S-transferase F2 89 211 - -
Stsc181278g00003 218 Gene3D Glutaredoxin 2 86 - -
Stsc181278g00003 218 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 91 218 IPR010987 -
Stsc181278g00003 218 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 2 83 IPR004045 -
Stsc181278g00003 218 CDD GST_N_Phi 3 78 - -
Stsc181278g00003 218 SUPERFAMILY GST C-terminal domain-like 84 211 IPR036282 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181278g00003 Stsc-Chr181278 8591 9791 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181278g00003 6 215 Glutathione S-transferase Gene Family AT2G47730 49.048 1.37e-68 209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181278g00003 K00799 - zju:107422694 354.369