Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181276g00014 ATGGATTCTGATAGGGATCAACAACATGAGGGTGTTTTTGTTTTCAATCTTCCCCAAGATCATGGGGTAAACTTCTCAACCCGGAGAGGGTTTATTACGAAACTCAAATCCGGGTTAAAAGAAACGTTCTTTCCTGATGATCCCTTCCGCCAGTTCAAGAATGAGAAGAGAACATCACGAAAGGTAGCAAAAGGGATTCAATACTTTGTTCCAATATTCGAGTGGCTTCCGAATTACTCGGCGGGCCTTTTTTGGTCGGATTTGATTGCCGGACTCACCATAACCAGCCTGGCCATCCCTCAGGGGATTAGTTATGCCAAACTCGCAAACCTTCCTCCCGTCATTGGTCTTTATTCAAGCTTTGTGCCACCATTAGTGTATGCTATATTTGGAAGCTCAAGACATGTGGCTGTGGGGACTATAGCGGCAGCATCATTGCTAGTTGGTCAAACTATTCAAACCGTGGCTGACCCAATTCAAGAACCTACCTTGTTCCTTCACTTGGTCTTCACAACCACCTTTGTCACCGGTTTATTCCAAGCCTCTCTTGGTCTTTTCAGGCTTGGGATATTGGTTGATTTTTTTTCCCATTCTACCATCACTGGATTCATGGGTGGAACAGCTGTGATCCTCATCCTCCAACAACTAAAGGGCATTTTTGGAATGAAGCATTTTTCTACCAAAACAGATGTTGTATCTGTGATCAAGGGCATCATTCACAACAGACATGAGATAAGGTGGGAAACCACTGTTCTCGGCGTGATCTTCGTTGCTTTTCTCCAATTTACCGTGCTTGTGAGAGAGAAAAAACCAAAGTTATTTTGGGTATCAGCTATAGCTCCAATGACAACGGTGGTGGTTGCTGGAGTTTTCACGTATCTGGTTAAGGGCCAAAATCATGGAATACAAATTGTGGGGCATTTACAAAAAGGAATAAACCCTTTGTCCATTCGTTATTTCAACTTTGATGCTAAATATTTACCAGCTGTGCTCCGAGCTGGCATTATCACGGGCATTTTGTCATTGGCGGAAGGAATAGCAATAGGAAGAAGCTTTTCTGTAACTGAAAATACACCTCATGATGGGAACAAAGAGATGATAGCTTTTGGCTTTATGAACTTATGTGGTTCTTTCACCTCATGTTACTTGACTAGTGGTCCATTTTCAAAAACGGCAGTGAATTACAACGCAGGGTGTAAGACAGCAATGGCAAATGTGGTGCAGGGAGTGTTAATGTTGTTAACACTCTTGTTTCTGGCACCATTATTTGGATACACTCCTCTTGTTGCTCTCTCTTCTATTATCATATCTGCTATGTTTGGACTCATCAAATATGGTGTCTTCATTCATCTCTTCAAGGTTGACAAGTTTGACTTTCTTATTTGCATGGCTGCCTTCTTGGGAGTCATTTTTCTTACCATGGATGAGGGCCTTATGATCTCTATTGCACTGAGCATTGTTAGAGCACTGTTATATGTGGCTAGGCCAGCCACATGCAAGCTTGGGAAGTTAGATGACTCATCAGCTTCTTATAGAGATGTTGATCAATACACTGCTGCCACAACATTCCCAGGAGTCTTGATTATTCAACTTGGTTCCCCCATTTACTTTGCCAATGCTATCTATGTCAAAGAAAGGATTATGAGGTACGTTAGAAGTGAGCAAGGCTCTGGTGAAGTTGTGGAGCAGATGATACTTGACTTTTCAGGAGTAACATCAATTGACATGACTGGTATCGAAGGATTGATAGAGATTTATAGAGTATTGGAAAAGAATGGAATTCGGATGTTATTAGTGAACCCAAGACTTGAGGTTATGGAGAAGCTAGTGGCATCTGATTTTGTAGACAAGGTTGGGAAGGATTCATTCTATCTGAATTTGGATGATGCAGTGAATGCAGCTCAATATTCACTTCATTTGCTCAAGACAAATGGCAATAATAGTAACCAAGACACAACAACTCATCAACATGGAAACGGCGATCATGCCTAA 1992 0.4177 MDSDRDQQHEGVFVFNLPQDHGVNFSTRRGFITKLKSGLKETFFPDDPFRQFKNEKRTSRKVAKGIQYFVPIFEWLPNYSAGLFWSDLIAGLTITSLAIPQGISYAKLANLPPVIGLYSSFVPPLVYAIFGSSRHVAVGTIAAASLLVGQTIQTVADPIQEPTLFLHLVFTTTFVTGLFQASLGLFRLGILVDFFSHSTITGFMGGTAVILILQQLKGIFGMKHFSTKTDVVSVIKGIIHNRHEIRWETTVLGVIFVAFLQFTVLVREKKPKLFWVSAIAPMTTVVVAGVFTYLVKGQNHGIQIVGHLQKGINPLSIRYFNFDAKYLPAVLRAGIITGILSLAEGIAIGRSFSVTENTPHDGNKEMIAFGFMNLCGSFTSCYLTSGPFSKTAVNYNAGCKTAMANVVQGVLMLLTLLFLAPLFGYTPLVALSSIIISAMFGLIKYGVFIHLFKVDKFDFLICMAAFLGVIFLTMDEGLMISIALSIVRALLYVARPATCKLGKLDDSSASYRDVDQYTAATTFPGVLIIQLGSPIYFANAIYVKERIMRYVRSEQGSGEVVEQMILDFSGVTSIDMTGIEGLIEIYRVLEKNGIRMLLVNPRLEVMEKLVASDFVDKVGKDSFYLNLDDAVNAAQYSLHLLKTNGNNSNQDTTTHQHGNGDHA 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181276g00014 663 Pfam Sulfate permease family 84 465 IPR011547 GO:0016020
Stsc181276g00014 663 Gene3D STAS domain 495 637 IPR036513 -
Stsc181276g00014 663 PANTHER SULFATE TRANSPORTER 34 637 IPR001902 GO:0016020|GO:0055085
Stsc181276g00014 663 ProSitePatterns SLC26A transporters signature. 113 134 IPR018045 GO:0008271|GO:0008272
Stsc181276g00014 663 SUPERFAMILY SpoIIaa-like 521 634 IPR036513 -
Stsc181276g00014 663 CDD STAS_SulP_like_sulfate_transporter 517 627 - -
Stsc181276g00014 663 MobiDBLite consensus disorder prediction 644 663 - -
Stsc181276g00014 663 ProSiteProfiles STAS domain profile. 516 634 IPR002645 -
Stsc181276g00014 663 Pfam STAS domain 518 630 IPR002645 -
Stsc181276g00014 663 NCBIfam sulfate permease 71 630 IPR001902 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181276g00014 Stsc-Chr181276 191460 199469 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181276g00014 18 642 Inorganic Solute Cotransporters AT5G19600 61.244 0.0 791
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181276g00014 K17471 - gmx:100789107 891.338