Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Stsc181275g00026 ATGTGCATGCTTCAGTTGGTGACTTCTGAATATCCTTATAGTGAATGTAGAAACTCAGCTCAGATATACAAGAAGGTTTCATCTGGTATAAAACCTATTGCACTTTCTAAAGTCAAAGATCCAGAAGTAAAATCCTTCATTGAAAAATGTCTTGTCCCAGCATCTCAAAGATTGTCTGCAAGGGAGCTTCTGATGCATTCCTTTCTTGACTTGAACGGATCAACAAGGATTCATCCTTTTCCATTACCAGATATTGTTCTTCCCAAATTTGGAGCCTTTGAAAGCCGATGCTTGATGTCAGAAGGTCCTAGTAGTGCACGTAGTGGAAATAATTCTTCGGATCTTGGTGGCATGAGCGAACTACCCGTGATCACTGTATTTGATAACTCTACAGATGATGCATCATCGTCTCATTCCCCATCTGTTGAGATAAGAATGTCAAACAGAGATGACATATTCTTTCTGAAAGGCCATGAAAATGATGAGAATTCCGTATCATTAGTTCTCCGGATAGCTGATGCGAGTGGAAGGGCAAGAAATATCCATTTCATATTCTATCTTGACACTGATACTCCTGTGTCCGTTTCAAGTGAAATGGTTGAACAACTTGAGCTTGCTGAACAAAATGTACTTTTCATAGCCGAGTTAATAGATTTGTTATTGCTGAAGTTGGTTCCTGACTGGGAACCTTGTGTTTCAATTGACCATTTGGTTTCTCCAAATGGCAAATATCATGTGACCCAACATAGAGCATTGGAGTCGGCAAAATGCCAAGAAATCCCAAAACTTCCCAGCCAAATTGTGCCTCAAGAGTTAGGTGCCTCGACCTCACCTGGAAGATCAGCCGCAAAAGAGAACCATGATAATATGGAATTTGATGAGGTTGTATCTCAAGAGAGCATTGGTATCCAAAGAGCAGTTAAGACAGATGATCTATGTTCCGAGATGTCGAATGCTTCAGCATCGTCAGAATTCAATGATAACAAGTTTTCTGTAGCTTCATTTATGTCTTATACTGAATCAGGACTAGCAGACTTAAACATAACTATACCGAACGGAGGGAGTCAATCCTCATTTGTATCTGAAATTGGGGCATCTCCTGATTATAGGATCAAGTCTTCAGAAATGGGAAGTGATGATACGATGAGCTTCTCTACTCATCCCATTAGTGTTTCCTCCGTGTCTGAACATGAGGATGAATTCAGAACGGAGCTAGAAATGATTGAACAGAAGTATCAAGATGCGATTAAAGATTTTTCAAGAAGAAGATACCAAGCCGTCGTCGAGATTAGAAGGAGAATGTCGGAAAAGATGCTATCATCATCATCATCATAG 1335 0.4 MCMLQLVTSEYPYSECRNSAQIYKKVSSGIKPIALSKVKDPEVKSFIEKCLVPASQRLSARELLMHSFLDLNGSTRIHPFPLPDIVLPKFGAFESRCLMSEGPSSARSGNNSSDLGGMSELPVITVFDNSTDDASSSHSPSVEIRMSNRDDIFFLKGHENDENSVSLVLRIADASGRARNIHFIFYLDTDTPVSVSSEMVEQLELAEQNVLFIAELIDLLLLKLVPDWEPCVSIDHLVSPNGKYHVTQHRALESAKCQEIPKLPSQIVPQELGASTSPGRSAAKENHDNMEFDEVVSQESIGIQRAVKTDDLCSEMSNASASSEFNDNKFSVASFMSYTESGLADLNITIPNGGSQSSFVSEIGASPDYRIKSSEMGSDDTMSFSTHPISVSSVSEHEDEFRTELEMIEQKYQDAIKDFSRRRYQAVVEIRRRMSEKMLSSSSS 444
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Stsc181275g00026 444 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 1 430 - -
Stsc181275g00026 444 ProSiteProfiles Protein kinase domain profile. 1 69 IPR000719 GO:0004672|GO:0005524|GO:0006468
Stsc181275g00026 444 MobiDBLite consensus disorder prediction 270 289 - -
Stsc181275g00026 444 Gene3D Transferase(Phosphotransferase) domain 1 1 75 - -
Stsc181275g00026 444 SUPERFAMILY Protein kinase-like (PK-like) 2 131 IPR011009 -
Stsc181275g00026 444 Coils Coil 398 418 - -
Stsc181275g00026 444 Gene3D - 163 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Stsc181275g00026 Stsc-Chr181275 165504 167296 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Stsc181275g00026 1 240 MAP Kinase Kinase Kinase AT1G49160 60.417 1.07e-99 303
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Stsc181275g00026 K08867 - gmx:121175054 457.988